G442680



Basic Information


Item Value
gene id G442680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 77953075 ~ 77953321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU501044
ccacaaacacaggtgggaaaaaggctgcctaagtatgattcccaatcagagacaacgatagacagctgcctctgattgggaaccatacccggcaaacaaagaaatagaaaagtagaatgcccacccaaatcacaccctgacctaaccaaagacagaaataaaaaggctatccaaggtcagggcgtgacagtacccccaccccacaaaggtgcggactccggccgcaaaacctgactctatgaGGGAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU501044 True 247 lncRNA 0.50 1 77953075 77953321

Neighbor


gene id symbol gene type direction distance location
znf648 LOC106560330 coding downstream 14074 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 78232 77871765 ~ 77874843 (-)
LOC110524609 fam69a coding downstream 310926 77627457 ~ 77642149 (-)
LOC110524608 evi5 coding downstream 335364 77558322 ~ 77617711 (-)
LOC110524607 LOC106560317 coding downstream 396207 77548860 ~ 77556868 (-)
glulb LOC106560331 coding upstream 30423 77983744 ~ 77987655 (-)
LOC110524621 med8 coding upstream 286447 78239768 ~ 78245830 (-)
hyi hyi coding upstream 429684 78383005 ~ 78387067 (-)
LOC110524635 LOC106560345 coding upstream 1265832 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 1289926 79243247 ~ 79282591 (-)
G442676 NA non-coding downstream 9226 77943273 ~ 77943849 (-)
G442664 NA non-coding downstream 44210 77903116 ~ 77908865 (-)
G442666 NA non-coding downstream 50747 77901782 ~ 77902328 (-)
G442649 NA non-coding downstream 71124 77881225 ~ 77881951 (-)
G442696 NA non-coding upstream 24322 77977643 ~ 77977982 (-)
G442703 NA non-coding upstream 37854 77991175 ~ 77991411 (-)
G442713 NA non-coding upstream 51088 78004409 ~ 78004634 (-)
G442714 NA non-coding upstream 51439 78004760 ~ 78004999 (-)
G442755 NA non-coding upstream 83476 78036797 ~ 78037009 (-)
G442381 rpl5 other downstream 325861 77623299 ~ 77627214 (-)
G442115 NA other downstream 545940 77406742 ~ 77407135 (-)
G441630 NA other downstream 931700 77013999 ~ 77021375 (-)
G441483 NA other downstream 1050304 76902382 ~ 76902771 (-)
G441168 glrx2 other downstream 1362705 76586458 ~ 76590370 (-)
G442807 NA other upstream 128424 78081745 ~ 78082010 (-)
G444001 NA other upstream 1011310 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1777666 79730987 ~ 79731536 (-)
G445115 NA other upstream 2029140 79982461 ~ 79987704 (-)

Expression



Co-expression Network