G443066


Basic Information

Item Value
gene id G443066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78233349 ~ 78237283 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU501489
actaAATTACTAATATGTAAATGTTTGTGGCGTTGCTGGTGTGCCATCTTCCTTCGGATTAGTCTTCATAGACATGGTGTTGAACTTTGAACTGACCATGAGGGGTCAGCAGTGTTTCACAGCTGAGTCTTTTTTGTGACAATATTCCACAATCTACAGTAAATCCTTCGGTCTTTAGGATGCAagttcatggtccaaacatacacTGTTATATTTTAGAGATTTTTTGCCTTTTCTCTGACAATTATCATGATACTTACATATGTTACATGATAATTACACATTTCTTCTCCCTGAGATTTTTGGATGAATACTTAACGTGACAGCTTCCTCCATATCCATGATCCTCTCTGAAAATCCCATATTCCCCCTGAAAACACCTCTGTAGATACATTCATAAAAATGGCCTTTGTATGTAGCTAGCCCAGCAAGATATTCTCGCAATGCTCACTTGGTTCTGGCTTTGTCTGCGAGGTGATTGCAATGCCAGTATATCTATGTCCTTGATCATCTAGAGAGGAGAATGTTTAGCATTTCTCAGTTCGGTTTGGATTTATGTTCCAGAGAAGATTGATGGTTTTTCTTATGGGTTGGATTTGAATGTTGGCTTTGTAATAATTGATTTTGGCACAGTTTGAGGGAAATAGACTCTACATTCTTTGAAGAAGAGGATAAGGTCCATATCTGGCTCATTAAGAAAGCTTTGGGCTAGCATCATAAAGCAAcgttatagcctacagtacaacATCAAACTCCCACACCAAAAAACAGGCCAGAAGTATAAGGTTTAAGTCACATGAAAGACCATGATGACACACTGATCTGTGAAATCTGATTAAAACGCTTACAAACATGTCTCCTTTATGAAACTTTGAGTACCAGAGGAATCAGAAGAATTTATTACAGATATGTGGGAGGCAAAGGAAAGGAAAGACAAGACGCAGGCATTCCTTTGAACAACAATTAGTGCCTTTGCCAAACTGAACAGTTTCCAAAAATGAAAACTGTAGACCTAAACCAATTTGAATATACAAAAACTTAGACCAGAGTTTAATCAATTTCAATCCAGTTggagttggaagtttacatacacttaggttggagtcacaaAAGTTGTTTTTCAatcattccacaaatttcttgttaacaaactatagttttggcaagtcggttaggacatctgacacaagtaatttttccaacaattgtttaaagacagattatttcactttttctctgtatcacaattccagtaggtcagaagtttaaatacactgaattgactgtgcctttaaacagcttggaaaattccagaaaattatgtcatggctttagaagcttctgataggctagttgacatactttgagtcaattggaggtgtaccagtggatgtatttcaaggcctaccttcaaactctttgcttgacatcatgggaaaatccaaagaaatcagccaagacctcagaaaaacaattgtagacctccacaagtctggtccatccttgggagcaatttccaaatgcctgaaggtaccgcgttcatctgtacaaacaatagtatgcaagtataaacaccatgggaccacacagccgtcataccactcaggaaggagacacagtctgtctcctagagatgaatgtactttggtgcgaaaagtgcaaatcaatcccagaacaatagcaaaggaccttgtgaacacacatacaaaagtatatatatccacagtaaaacgagtcctatatcaacataacctgaaagaccgctcagcaaggaagaagccactgctccaaaactgacataaaaaagccagactatggtttgcaactgcacatgggaacaaagatcatactttttggagaaatgtcctctagtctgatgaaacaaaaatagaactgttttgccataatgaccatcttaatgtttagaggaaaaagggggaggcttgcaagccgaagaacacgatcccaaccgtgaagcacaggggtggtagcatcatgttgtgtgggtgctttgctgcaggagggactagtgcacttcacaaaatagatggcatcatgagggaggaaaatcatgtggatatattgaagcaacatctcaagacattagtcaggaagttaaagcttggtcgcaaatgggtcttccaaatggacaatgaccccaggcatacttccaaagttttggcaaaatggcttaaggacagcaaagtcaaggtattggcgtggccatcacaaagccctgactgcaatcctatagaaaatgtgtgggcagaactgaaaaagcgtgtaaggaggcctacaaacctgactcggtaacaccagctttgtcaggaggaatggaacaaaattcacccaacttattgtgggaagcttatggaaggctacccgaaacgcttgacacaagttaaacaatttatagacaatgccaccaaatactaattgagtgtatgtaaacttctgacccaccgggaatgtgatgaaagaaataaaagctgaaataaatcattctctctactattattctgacatttcacattcttaaaataaagtggtgatactaactgacctaaaacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttctgacttcaactcatTCAggaggataaaaaataaaaaaactatttatttcctaaattgactgaattaaaattgcattgaccccaaccctggtcaaCACTGCAGTATCTCCCTCACCATGATGTGTCCATCTCCAACTGCCCATCATCATATCAACTCCTTCCCAGCAGGACCCAGAGAGAGGCCCTTCCCTTACCGATCTCTTCTCCTAGAAGAGGCTCTATTATCTCCTGCCTTCCAGGACCACAACACTTCAGCACCACAGTCCCTGTAATCAGACCGCAGCCCCTCAGAGCCTGCCATGTCTCTGCTTCCTCAGCCATTCCCTCAGGCTTTCATTGCAGCCCTTCATACGGTGTATTGTATTCATACAGTGTATGTCAATTGTGCTGGCAGGCATTGGTTTTGTTAACACAATATGCACTCTGAATAACACTAACCTTGATATGAGGAGTGtgcattgtttattgttttgcgATTGAGACAGTCAATGTGGGCATTGGCAAGGGATATTTGTGTGCATCTTGCATTATACTATgttggaagtattcagaccccttttccacattttgttacgttacagcataattctgaaatggattcaatagtttttttctcctcttcaatctacacacaataccacataatgacaaagcaaaacatttttgccaattttacagttgaccggggcagctctagcagggcagaaatttgatgaactaacttgttggaaaggtggcatcctatgatggtgccatgttgaaagtcactgagatcttcagaaaggccattctactgccaatgtttgtctatggagattgcatggctgtatgcttgattttatacacttgtcagcaatgggtgtggctgaaatagccaaatccactaaatgaatgggtgtccacatacttttgtatataggaTGTATGTGTTcttgagagtctcacctttccacacaggggtcatattagtgtgtatcACAAAgtgttcagacgctacagacagaagttggcagagaGGTTGTATCGACTTCAGAGGACACCAtcgtgttcatgagagtctcctctttccagAGAGGGGTCATAATAATTTGTAGTCCAAACCTTTCGGACACTACAGATGATTtagtgagaagacagattttcgaGATGTCTTGTGGTCTGACAATACAgagctctagctctgtcacctttcactacAAGTGCAGAAATTTTTAGGCGGATGCGGTGGACATATCTCGagtttaaattgacagatttttatggggattttgtGTTATGCTAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501489 True 3935 lncRNA 0.40 1 78233349 78237283

Neighbor

gene id symbol gene type direction distance location
glulb LOC106560331 coding downstream 245694 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 294348 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 358506 77871765 ~ 77874843 (-)
LOC110524609 fam69a coding downstream 591200 77627457 ~ 77642149 (-)
LOC110524608 evi5 coding downstream 615638 77558322 ~ 77617711 (-)
LOC110524621 med8 coding upstream 2485 78239768 ~ 78245830 (-)
hyi hyi coding upstream 145722 78383005 ~ 78387067 (-)
LOC110524635 LOC106560345 coding upstream 981870 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 1005964 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 1056976 79294259 ~ 79294385 (-)
G443122 NA non-coding downstream 2840 78229753 ~ 78230509 (-)
G443067 NA non-coding downstream 5114 78224562 ~ 78228235 (-)
G443082 NA non-coding downstream 68791 78163103 ~ 78164558 (-)
G442759 NA non-coding downstream 194752 78038321 ~ 78038597 (-)
G442755 NA non-coding downstream 196340 78036797 ~ 78037009 (-)
G443147 NA non-coding upstream 60485 78297768 ~ 78298784 (-)
G443159 NA non-coding upstream 89669 78326952 ~ 78327162 (-)
G443160 NA non-coding upstream 90913 78328196 ~ 78328428 (-)
G443162 NA non-coding upstream 94299 78331582 ~ 78331821 (-)
G443164 NA non-coding upstream 98194 78335477 ~ 78335918 (-)
G442807 NA other downstream 151339 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 606135 77623299 ~ 77627214 (-)
G442115 NA other downstream 826214 77406742 ~ 77407135 (-)
G441630 NA other downstream 1211974 77013999 ~ 77021375 (-)
G441483 NA other downstream 1330578 76902382 ~ 76902771 (-)
G444001 NA other upstream 727348 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1493704 79730987 ~ 79731536 (-)
G445115 NA other upstream 1745178 79982461 ~ 79987704 (-)
G445197 NA other upstream 1939479 80176762 ~ 80177080 (-)

Expression


Co-expression Network