G443165



Basic Information


Item Value
gene id G443165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78336272 ~ 78336766 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU501607
accggagagcatgccctccgatttgacacactgaactctgtctgcaaagtagttggtgaaccaggcaaggcagtcatcagaaaaaccgaggctactgagtctgccgataagaatatggtgattgacagagtcgaaagccttggcaaggtcgatgaagacggctgcacagtactgtcttttatcgatggcggttatgatatcgtttagtaccttgagcgtggctgaggtgcacccgtgaccggctctgaaaccagattgcacagcggagaaggtacggtgggatttgagatggtcagtgacctgtttgttgacttggctttcgaagaccttagataggcagggcaggatggatataggtctgtaacagtttgggtaaagggtgtctccccctttgaagagggggatgactgcggcagctttccaatccttggggatctcagacgatatgaaagagaggttgaacaggctggtaatagtgttacctagcctcagtgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU501607 True 495 lncRNA 0.50 1 78336272 78336766

Neighbor


gene id symbol gene type direction distance location
LOC110524621 med8 coding downstream 90442 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 348617 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 397271 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 461429 77871765 ~ 77874843 (-)
LOC110524609 fam69a coding downstream 694123 77627457 ~ 77642149 (-)
hyi hyi coding upstream 46239 78383005 ~ 78387067 (-)
LOC110524635 LOC106560345 coding upstream 882387 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 906481 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 957493 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 1048774 79385540 ~ 79459507 (-)
G443164 NA non-coding downstream 354 78335477 ~ 78335918 (-)
G443162 NA non-coding downstream 4451 78331582 ~ 78331821 (-)
G443160 NA non-coding downstream 7844 78328196 ~ 78328428 (-)
G443159 NA non-coding downstream 9110 78326952 ~ 78327162 (-)
G443147 NA non-coding downstream 37488 78297768 ~ 78298784 (-)
G443166 NA non-coding upstream 423 78337189 ~ 78337737 (-)
G443167 NA non-coding upstream 992 78337758 ~ 78337976 (-)
G443169 NA non-coding upstream 3649 78340415 ~ 78341873 (-)
G443189 NA non-coding upstream 30736 78367502 ~ 78368783 (-)
G443224 NA non-coding upstream 89879 78426645 ~ 78429140 (-)
G442807 NA other downstream 254262 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 709058 77623299 ~ 77627214 (-)
G442115 NA other downstream 929137 77406742 ~ 77407135 (-)
G441630 NA other downstream 1314897 77013999 ~ 77021375 (-)
G441483 NA other downstream 1433501 76902382 ~ 76902771 (-)
G444001 NA other upstream 627865 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1394221 79730987 ~ 79731536 (-)
G445115 NA other upstream 1645695 79982461 ~ 79987704 (-)
G445197 NA other upstream 1839996 80176762 ~ 80177080 (-)

Expression



Co-expression Network