G443304



Basic Information


Item Value
gene id G443304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78485991 ~ 78486198 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU501754
TACTAATACAATgcttattctattctactgagccgtTTACATTATGTTCGTACTCTTATCTCTTAtcatttcttattgttgttgtgttgttgataAGGAACCTGCAAATAAGCATTTtgttggacggtgtataccattTACATCCTGTACATTCGACTAATAAAACGTTAAACTTGAATATGAGTTGCAAAAGATGCTCAATATATAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU501754 True 208 lncRNA 0.32 1 78485991 78486198

Neighbor


gene id symbol gene type direction distance location
hyi hyi coding downstream 98924 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 240161 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 498336 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 546990 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 611148 77871765 ~ 77874843 (-)
LOC110524635 LOC106560345 coding upstream 732955 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 757049 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 808061 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 899342 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 1050386 79536584 ~ 79606825 (-)
G443224 NA non-coding downstream 56851 78426645 ~ 78429140 (-)
G443189 NA non-coding downstream 117208 78367502 ~ 78368783 (-)
G443169 NA non-coding downstream 144118 78340415 ~ 78341873 (-)
G443167 NA non-coding downstream 148015 78337758 ~ 78337976 (-)
G443166 NA non-coding downstream 148254 78337189 ~ 78337737 (-)
G443357 NA non-coding upstream 20999 78507197 ~ 78511955 (-)
G443358 NA non-coding upstream 21392 78507590 ~ 78519646 (-)
G443360 NA non-coding upstream 22553 78508751 ~ 78528411 (-)
G443397 NA non-coding upstream 84622 78570820 ~ 78571051 (-)
G443411 NA non-coding upstream 97275 78583473 ~ 78583678 (-)
G442807 NA other downstream 403981 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 858777 77623299 ~ 77627214 (-)
G442115 NA other downstream 1078856 77406742 ~ 77407135 (-)
G441630 NA other downstream 1464616 77013999 ~ 77021375 (-)
G441483 NA other downstream 1583220 76902382 ~ 76902771 (-)
G444001 NA other upstream 478433 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1244789 79730987 ~ 79731536 (-)
G445115 NA other upstream 1496263 79982461 ~ 79987704 (-)
G445197 NA other upstream 1690564 80176762 ~ 80177080 (-)

Expression



Co-expression Network