G443357


Basic Information

Item Value
gene id G443357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78507197 ~ 78511955 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU501814
acagtagaagagaatatggagaagagagtagactacagtagaagagaataggaagaagagagtagactacagtagaagagaatagggataagagagtagactacagtagaagataaaagggagaagacagtagactacagtacaagtgaaaagggagaagagagtagactacagtagaagagaaaagggagaagagagtagactacaatagaatggaataggaagaagagagtagactacagtagaagtgaaAAGGGAGAACAGAGTAGACgacagtagaagagaataggaagaagagagtagactacagtagaagagaatagggagaagagagtagactacagtagaagataaaagggagaagacagtagactacagtacaagtgaaaagggagaagagagtagactacagtagaagagaaaagggagaagagagtagactacagtaaagataatagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagtagaagagaatagggagaagagagtagactacagtagaagagaatagggagaagagagtagactacagtagaagtgaaaagggagaagcgAGTAGACTATAGTagaagtgaaaagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagtaaagataatagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagcagaagtgaatagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagtagaatagaatatggagaagagagtagactacagtagaatagaaaagggagaagagagtagactacagtagaagtgaaaagggagaagagagtagactacagtagaagagaatagggagaagagagtagactacagtagaatagaatagggagaagagagtagactacagtagaagataaaagggagaagagactagactacagtagaatagaatagagagaagagagtagactacagtagaagtgaaaagggagaagagagtagcctacagtagaagataaaagggagaagagagtagactaaggtaaaataaaatagggagaagagagtagactacagtagaagtgaaaatggagaagagagtagactacagtagaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501814 True 1233 lncRNA 0.39 3 78507197 78511955

Neighbor

gene id symbol gene type direction distance location
hyi hyi coding downstream 120130 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 261367 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 519542 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 568196 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 632354 77871765 ~ 77874843 (-)
LOC110524635 LOC106560345 coding upstream 707198 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 731292 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 782304 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 873585 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 1024629 79536584 ~ 79606825 (-)
G443304 NA non-coding downstream 20999 78485991 ~ 78486198 (-)
G443224 NA non-coding downstream 78057 78426645 ~ 78429140 (-)
G443189 NA non-coding downstream 138414 78367502 ~ 78368783 (-)
G443169 NA non-coding downstream 165324 78340415 ~ 78341873 (-)
G443167 NA non-coding downstream 169221 78337758 ~ 78337976 (-)
G443397 NA non-coding upstream 58865 78570820 ~ 78571051 (-)
G443411 NA non-coding upstream 71518 78583473 ~ 78583678 (-)
G443415 NA non-coding upstream 73144 78585099 ~ 78585453 (-)
G443432 NA non-coding upstream 92400 78604355 ~ 78604897 (-)
G443478 NA non-coding upstream 125539 78637494 ~ 78637718 (-)
G442807 NA other downstream 425187 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 879983 77623299 ~ 77627214 (-)
G442115 NA other downstream 1100062 77406742 ~ 77407135 (-)
G441630 NA other downstream 1485822 77013999 ~ 77021375 (-)
G441483 NA other downstream 1604426 76902382 ~ 76902771 (-)
G444001 NA other upstream 452676 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1219032 79730987 ~ 79731536 (-)
G445115 NA other upstream 1470506 79982461 ~ 79987704 (-)
G445197 NA other upstream 1664807 80176762 ~ 80177080 (-)

Expression


Co-expression Network