G443415



Basic Information


Item Value
gene id G443415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78585099 ~ 78585453 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU501877
gagatattgtctctagaaacatcattgaaaccaggagatgtcattgcatgtgtgggtggtggaactaataggttggataaggtataatgagcaggactagaggctctacagtgaaataagccaataaacactaaccagaacagcaatggacaaggcatattgacattaaggagaggcatgctcagtcgagtgatcaaaagggtccagtgagtggagaggttggttgggggtcacagcgatttagacagctaaatcggtagcaagctagcataggagcaagctagcataggatggaggtctgttattagccaactcttgcgttccgtcagtagattagtgggtttccgtgtggtag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU501877 True 355 lncRNA 0.45 1 78585099 78585453

Neighbor


gene id symbol gene type direction distance location
hyi hyi coding downstream 198032 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 339269 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 597444 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 646098 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 710256 77871765 ~ 77874843 (-)
LOC110524635 LOC106560345 coding upstream 633700 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 657794 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 708806 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 800087 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 951131 79536584 ~ 79606825 (-)
G443411 NA non-coding downstream 1421 78583473 ~ 78583678 (-)
G443397 NA non-coding downstream 14048 78570820 ~ 78571051 (-)
G443360 NA non-coding downstream 56688 78508751 ~ 78528411 (-)
G443358 NA non-coding downstream 65453 78507590 ~ 78519646 (-)
G443357 NA non-coding downstream 73144 78507197 ~ 78511955 (-)
G443432 NA non-coding upstream 18902 78604355 ~ 78604897 (-)
G443478 NA non-coding upstream 52041 78637494 ~ 78637718 (-)
G443849 NA non-coding upstream 128918 78714371 ~ 78717018 (-)
G443876 NA non-coding upstream 183461 78768914 ~ 78769201 (-)
G443892 NA non-coding upstream 204900 78790353 ~ 78793026 (-)
G442807 NA other downstream 503089 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 957885 77623299 ~ 77627214 (-)
G442115 NA other downstream 1177964 77406742 ~ 77407135 (-)
G441630 NA other downstream 1563724 77013999 ~ 77021375 (-)
G441483 NA other downstream 1682328 76902382 ~ 76902771 (-)
G444001 NA other upstream 379178 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 1145534 79730987 ~ 79731536 (-)
G445115 NA other upstream 1397008 79982461 ~ 79987704 (-)
G445197 NA other upstream 1591309 80176762 ~ 80177080 (-)

Expression



Co-expression Network