G443972


Basic Information

Item Value
gene id G443972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78931526 ~ 78932816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU502485
gtagtggtagtagtaacagtagtagtagtaacagtagtagtagtagtagtagtaacagcagtagtagtagtaacagtagtagtagtagtaacagtagtagtagtaacagtagtagtagtagtagtagtagtagttgtagtagtagtagtagtagtagtagtagtagtagtagtagtagttgtaacagtagtagtaacagtagtagtaacagtagaagtagcagtggtagtaacagtagttgTAACAGCAGTAATAACAGTagcggcagtagtagtagtagtaacagtagaagtagtagtagtagtagtaacagtagtagtagtaatagtagtaacagcagtaataACAGTAGCGGCAGTGGTAGTGGTAACAGTAGTGGtaacagtagaagtagtagtagtagtagtagcagtagtagtaacagtagtagtaacagcagtaataACAGTagcggcagtagtagtagtagcagtagtggtaacagtagtggtaacagtagtagtagtagtagtggtaacagCAGTAATAACAGTAGTGACAGTGGTAACAGTagtggtaacagtagtagtagtagtagtagtagtaacagcagtaataacagtagtggtagtggtaacagtagtggtaacagtagtggtagcagtagtggtaacagtagaagtagcagtagtagtagtagtagtagtagcagtagtagtaacagtagtagtagcagcagtaataacAGTagcggcagtagtagtagtagcagtagtggtaacagtagtagtaacagtagtggtaacagtagtagtagtagtagtagcagtagtagttgtagtaacagtagtagtaacagcagtaataACAGTagcggcagtagtagtagtagcagtagtggtaacagtagtggtaacagtagtagtagtagtagtagtaacagtagtggtaacagtagtagtagtagtagtagcagtagtagtagtagtaacagtagtagtaacagcagtaacagtagaagtaacagtagtggcagtagtagtagtagtagtagcagtagtaataacaGTAGCAGGGCTGGTTTAGTGCTAGGAAAGTAGTCTCCAGCCTGACCAcatcagagaggagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502485 True 1108 lncRNA 0.39 2 78931526 78932816

Neighbor

gene id symbol gene type direction distance location
hyi hyi coding downstream 544459 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 685696 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 943871 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 992525 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 1056683 77871765 ~ 77874843 (-)
LOC110524635 LOC106560345 coding upstream 286337 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 310431 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 361443 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 452724 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 603768 79536584 ~ 79606825 (-)
G443892 NA non-coding downstream 138500 78790353 ~ 78793026 (-)
G443876 NA non-coding downstream 162325 78768914 ~ 78769201 (-)
G443849 NA non-coding downstream 214508 78714371 ~ 78717018 (-)
G443478 NA non-coding downstream 293808 78637494 ~ 78637718 (-)
G443432 NA non-coding downstream 326629 78604355 ~ 78604897 (-)
G444000 NA non-coding upstream 30350 78963166 ~ 79060903 (-)
G444017 NA non-coding upstream 57588 78990404 ~ 78991082 (-)
G443998 NA non-coding upstream 125973 79058789 ~ 79059741 (-)
G444074 NA non-coding upstream 161837 79094653 ~ 79095635 (-)
G444104 NA non-coding upstream 209948 79142764 ~ 79143169 (-)
G442807 NA other downstream 849516 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 1304312 77623299 ~ 77627214 (-)
G442115 NA other downstream 1524391 77406742 ~ 77407135 (-)
G441630 NA other downstream 1910151 77013999 ~ 77021375 (-)
G441483 NA other downstream 2028755 76902382 ~ 76902771 (-)
G444001 NA other upstream 31815 78964631 ~ 78966029 (-)
G444691 LOC106605670 other upstream 798171 79730987 ~ 79731536 (-)
G445115 NA other upstream 1049645 79982461 ~ 79987704 (-)
G445197 NA other upstream 1243946 80176762 ~ 80177080 (-)

Expression


Co-expression Network