G444000



Basic Information


Item Value
gene id G444000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 78963166 ~ 79060903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU502513
CAAGCCAAAAATGTTTTTACTGAAACAAAATTATCATCTTTACAAAATGCATGAATGGTAGTACATTTTTCACAGAAAGGAAAAAAGGTCACATGAACAGGCCAGGGatcagtcccaaatggcaccccattccctatatagtgcactacttttgaccagggctGTAAGGACACCGACATACAAGTAGTGCACCATAAAggcaatagggtgcaatttgggacgcagtccGGGTGGATGGATGCGCTTCAGACTGAAGAGAGGAAGTCAAAGACAGGAGGGGGGTTTCCAACTGAGAACACCCAGGAAGactcatccccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU502513 True 318 lncRNA 0.46 2 78963166 79060903

Neighbor


gene id symbol gene type direction distance location
hyi hyi coding downstream 576099 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 717336 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 975511 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 1024165 77914925 ~ 77939001 (-)
gadd45ab LOC106560326 coding downstream 1088323 77871765 ~ 77874843 (-)
LOC110524635 LOC106560345 coding upstream 158250 79219153 ~ 79237461 (-)
LOC118964722 LOC106584191 coding upstream 182344 79243247 ~ 79282591 (-)
LOC118964780 NA coding upstream 233356 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 324637 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 475681 79536584 ~ 79606825 (-)
G443972 NA non-coding downstream 30350 78931526 ~ 78932816 (-)
G443892 NA non-coding downstream 170140 78790353 ~ 78793026 (-)
G443876 NA non-coding downstream 193965 78768914 ~ 78769201 (-)
G443849 NA non-coding downstream 246148 78714371 ~ 78717018 (-)
G443478 NA non-coding downstream 325448 78637494 ~ 78637718 (-)
G444074 NA non-coding upstream 33750 79094653 ~ 79095635 (-)
G444104 NA non-coding upstream 81861 79142764 ~ 79143169 (-)
G444106 NA non-coding upstream 83185 79144088 ~ 79144391 (-)
G444115 NA non-coding upstream 93090 79153993 ~ 79154213 (-)
G444141 NA non-coding upstream 147888 79208791 ~ 79209012 (-)
G442807 NA other downstream 881156 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 1335952 77623299 ~ 77627214 (-)
G442115 NA other downstream 1556031 77406742 ~ 77407135 (-)
G441630 NA other downstream 1941791 77013999 ~ 77021375 (-)
G441483 NA other downstream 2060395 76902382 ~ 76902771 (-)
G444691 LOC106605670 other upstream 670084 79730987 ~ 79731536 (-)
G445115 NA other upstream 921558 79982461 ~ 79987704 (-)
G445197 NA other upstream 1115859 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 1164572 80223240 ~ 80233361 (-)

Expression



Co-expression Network