G444170


Basic Information

Item Value
gene id G444170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 79259305 ~ 79260230 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU502698
cctaaacctaaccctagcactaactctagccactaaacctaaccctacctctaactctagcccctaaacctaaccctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcactgactctagccactaaacctaaccctaaacctgaccctagcactaactctagcccctaaacctaacattaactctagcccctaaacctgaccctagcactaactctagccactaaacctaaccctagcactaaccctagcccctaaacctaaccctaccactaactctagcccctaaacctaaccctagcccctaaacctaaccctagcactaactctagcccctaaacctaaacctaacactaactctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcactaactctagaccctaaacctaaccatggcactaaccctagccattaaacctaaccctaccactaactctagcccctaaacctaaccctagcccctaaacctatccctagcactaactctagtccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcccctaaacctaaccctagcactaactctagcccctaaacctaaccctagcacaaactctagcccctaaacctaaccctagcactgactctagccactaaacctaaccctaaacctgaccctagcactaactctagcccctaaacctaaccctagcattaactctagcccctaaacctgaccctagcactaactctagccactaaacctaaacctaacactaactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502698 True 926 lncRNA 0.48 1 79259305 79260230

Neighbor

gene id symbol gene type direction distance location
LOC110524635 LOC106560345 coding downstream 32666 79219153 ~ 79237461 (-)
hyi hyi coding downstream 872238 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 1013475 78239768 ~ 78245830 (-)
glulb LOC106560331 coding downstream 1271650 77983744 ~ 77987655 (-)
znf648 LOC106560330 coding downstream 1320304 77914925 ~ 77939001 (-)
LOC118964780 NA coding upstream 34029 79294259 ~ 79294385 (-)
cdh2 LOC106560349 coding upstream 125310 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 276354 79536584 ~ 79606825 (-)
LOC110524638 LOC106560389 coding upstream 604947 79865177 ~ 79896739 (-)
b4galt6 LOC106560385 coding upstream 727896 79988126 ~ 80016243 (-)
G444167 NA non-coding downstream 5692 79253157 ~ 79253613 (-)
G444149 NA non-coding downstream 41806 79217282 ~ 79217499 (-)
G444145 NA non-coding downstream 45616 79213320 ~ 79213689 (-)
G444144 NA non-coding downstream 46247 79212845 ~ 79213058 (-)
G444235 NA non-coding upstream 92620 79352850 ~ 79353065 (-)
G444238 NA non-coding upstream 93938 79354168 ~ 79354403 (-)
G444318 NA non-coding upstream 121012 79381242 ~ 79381457 (-)
G444443 NA non-coding upstream 264307 79524537 ~ 79525518 (-)
G444001 NA other downstream 293276 78964631 ~ 78966029 (-)
G442807 NA other downstream 1177295 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 1632091 77623299 ~ 77627214 (-)
G442115 NA other downstream 1852170 77406742 ~ 77407135 (-)
G444691 LOC106605670 other upstream 470757 79730987 ~ 79731536 (-)
G445115 NA other upstream 722231 79982461 ~ 79987704 (-)
G445197 NA other upstream 916532 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 965245 80223240 ~ 80233361 (-)
G445220 NA other upstream 985713 80245943 ~ 80261505 (-)

Expression


Co-expression Network