G444235



Basic Information


Item Value
gene id G444235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 79352850 ~ 79353065 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU502767
ATTTAATCCTctggtttccctttctgttttgttTGTGATTGTCTTTCGTGCATTCCggtgtgttgtattttgagtcCTGTTTTGTCCTTGTTTGGAACGGGATTTTGTTACGTTTTGGATTGAGTAAATCAGTGATTGTTACTCTtatctgtgtcctgcgcctgactccttcgcTATCTTTTAGATAGCCTCTgacagtggtgatcctaactgacc

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU502767 True 216 lncRNA 0.41 1 79352850 79353065

Neighbor


gene id symbol gene type direction distance location
LOC118964780 NA coding downstream 58465 79294259 ~ 79294385 (-)
LOC118964722 LOC106584191 coding downstream 70259 79243247 ~ 79282591 (-)
LOC110524635 LOC106560345 coding downstream 126211 79219153 ~ 79237461 (-)
hyi hyi coding downstream 965783 78383005 ~ 78387067 (-)
LOC110524621 med8 coding downstream 1107020 78239768 ~ 78245830 (-)
cdh2 LOC106560349 coding upstream 32475 79385540 ~ 79459507 (-)
LOC118964535 NA coding upstream 183519 79536584 ~ 79606825 (-)
LOC110524638 LOC106560389 coding upstream 512112 79865177 ~ 79896739 (-)
b4galt6 LOC106560385 coding upstream 635061 79988126 ~ 80016243 (-)
LOC110524643 LOC106560384 coding upstream 722631 80075696 ~ 80166743 (-)
G444170 NA non-coding downstream 92620 79259305 ~ 79260230 (-)
G444167 NA non-coding downstream 99237 79253157 ~ 79253613 (-)
G444149 NA non-coding downstream 135351 79217282 ~ 79217499 (-)
G444145 NA non-coding downstream 139161 79213320 ~ 79213689 (-)
G444238 NA non-coding upstream 1103 79354168 ~ 79354403 (-)
G444318 NA non-coding upstream 28177 79381242 ~ 79381457 (-)
G444443 NA non-coding upstream 171472 79524537 ~ 79525518 (-)
G444449 NA non-coding upstream 179441 79532506 ~ 79532738 (-)
G444001 NA other downstream 386821 78964631 ~ 78966029 (-)
G442807 NA other downstream 1270840 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 1725636 77623299 ~ 77627214 (-)
G442115 NA other downstream 1945715 77406742 ~ 77407135 (-)
G444691 LOC106605670 other upstream 377922 79730987 ~ 79731536 (-)
G445115 NA other upstream 629396 79982461 ~ 79987704 (-)
G445197 NA other upstream 823697 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 872410 80223240 ~ 80233361 (-)
G445220 NA other upstream 892878 80245943 ~ 80261505 (-)

Expression



Co-expression Network