G444443


Basic Information

Item Value
gene id G444443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 79524537 ~ 79525518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU502988
cagagaacagtacagtagagtgcagtagtaTACAGTAGAGTGCTATACAGTagcgtacagtacagtagagtgctatacagcagagaacagtacagtagagtgctaTACAGCAggcagagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgatatacagcagagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgctaTACAGccgagaacagtacagtagagtacagtaccataAAGTAATGTGTTATACAGCAGAgaacagtacagcagagtacagtaccaAAAAGTAACGTGCTATACagcagagaacagtacagtagagtgctaTACAGccgagaacagtacagtagagtacagtaccataAAGTAATGTGTTATACAGCAGAgaacagtacagcagagtacagtaccatAAAGTAACGTGCTATACagcagagaacagtacagtagagtgctaTACAGccgagaacagtacagtagagtacagtaccataAAGTAATGTGTTATACAGCAGAGAACAGTACAGtagagtgctaTACAGccgagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgctatacagcagagaacagtacagtagagtgctaTACAGccgagaacagtacagtagagtacagtaccataAAGTAA

Function

NR:

description
PREDICTED: variable charge X-linked protein 3B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502988 True 762 lncRNA 0.42 2 79524537 79525518

Neighbor

gene id symbol gene type direction distance location
cdh2 LOC106560349 coding downstream 65030 79385540 ~ 79459507 (-)
LOC118964780 NA coding downstream 230152 79294259 ~ 79294385 (-)
LOC118964722 LOC106584191 coding downstream 241946 79243247 ~ 79282591 (-)
LOC110524635 LOC106560345 coding downstream 297898 79219153 ~ 79237461 (-)
hyi hyi coding downstream 1137470 78383005 ~ 78387067 (-)
LOC118964535 NA coding upstream 11066 79536584 ~ 79606825 (-)
LOC110524638 LOC106560389 coding upstream 339659 79865177 ~ 79896739 (-)
b4galt6 LOC106560385 coding upstream 462608 79988126 ~ 80016243 (-)
LOC110524643 LOC106560384 coding upstream 550178 80075696 ~ 80166743 (-)
LOC118964650 LOC106581256 coding upstream 666867 80192385 ~ 80197919 (-)
G444318 NA non-coding downstream 143080 79381242 ~ 79381457 (-)
G444238 NA non-coding downstream 170134 79354168 ~ 79354403 (-)
G444235 NA non-coding downstream 171472 79352850 ~ 79353065 (-)
G444170 NA non-coding downstream 264307 79259305 ~ 79260230 (-)
G444449 NA non-coding upstream 6988 79532506 ~ 79532738 (-)
G444572 NA non-coding upstream 102916 79628434 ~ 79628680 (-)
G444573 NA non-coding upstream 104392 79629910 ~ 79630114 (-)
G444577 NA non-coding upstream 106920 79632438 ~ 79632646 (-)
G444581 NA non-coding upstream 114309 79639827 ~ 79640070 (-)
G444001 NA other downstream 558508 78964631 ~ 78966029 (-)
G442807 NA other downstream 1442527 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 1897323 77623299 ~ 77627214 (-)
G442115 NA other downstream 2117402 77406742 ~ 77407135 (-)
G444691 LOC106605670 other upstream 205469 79730987 ~ 79731536 (-)
G445115 NA other upstream 456943 79982461 ~ 79987704 (-)
G445197 NA other upstream 651244 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 699957 80223240 ~ 80233361 (-)
G445220 NA other upstream 720425 80245943 ~ 80261505 (-)

Expression


Co-expression Network