G444705



Basic Information


Item Value
gene id G444705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 79748041 ~ 79748257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU503263
atttccatccctaactataacatgttctgacaagatagaactgccaaagggggaagagttgcaatctactgcagagatagcctgcagagttctgtcatactatccaggtctatgcccaaacaatttgagattttccttttaaaaatccacctttccagaaacaagtctctcaccgttgccgcttgttatagacccccctgaGCCCCCAGTTTTGCCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU503263 True 217 lncRNA 0.45 1 79748041 79748257

Neighbor


gene id symbol gene type direction distance location
LOC118964535 NA coding downstream 141216 79536584 ~ 79606825 (-)
cdh2 LOC106560349 coding downstream 288534 79385540 ~ 79459507 (-)
LOC118964780 NA coding downstream 453656 79294259 ~ 79294385 (-)
LOC118964722 LOC106584191 coding downstream 465450 79243247 ~ 79282591 (-)
LOC110524635 LOC106560345 coding downstream 521402 79219153 ~ 79237461 (-)
LOC110524638 LOC106560389 coding upstream 116920 79865177 ~ 79896739 (-)
b4galt6 LOC106560385 coding upstream 239869 79988126 ~ 80016243 (-)
LOC110524643 LOC106560384 coding upstream 327439 80075696 ~ 80166743 (-)
LOC118964650 LOC106581256 coding upstream 444128 80192385 ~ 80197919 (-)
LOC118964651 LOC106581256 coding upstream 460155 80208412 ~ 80210788 (-)
G444583 NA non-coding downstream 104497 79643311 ~ 79643544 (-)
G444581 NA non-coding downstream 107971 79639827 ~ 79640070 (-)
G444577 NA non-coding downstream 115395 79632438 ~ 79632646 (-)
G444573 NA non-coding downstream 117927 79629910 ~ 79630114 (-)
G444572 NA non-coding downstream 119361 79628434 ~ 79628680 (-)
G444731 NA non-coding upstream 15104 79763361 ~ 79763649 (-)
G444769 NA non-coding upstream 45244 79793501 ~ 79793707 (-)
G444780 LOC100194703 non-coding upstream 50730 79798987 ~ 79799273 (-)
G444788 NA non-coding upstream 54155 79802412 ~ 79802989 (-)
G444791 NA non-coding upstream 55220 79803477 ~ 79803730 (-)
G444691 LOC106605670 other downstream 16505 79730987 ~ 79731536 (-)
G444001 NA other downstream 782012 78964631 ~ 78966029 (-)
G442807 NA other downstream 1666031 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 2120827 77623299 ~ 77627214 (-)
G445115 NA other upstream 234204 79982461 ~ 79987704 (-)
G445197 NA other upstream 428505 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 477218 80223240 ~ 80233361 (-)
G445220 NA other upstream 497686 80245943 ~ 80261505 (-)
G446775 NA other upstream 2195028 81943285 ~ 81943611 (-)

Expression



Co-expression Network