Gene
RNA
| Item | Value |
|---|---|
| gene id | G445055 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 79909160 ~ 79909360 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH3 domain-binding glutamic acid-rich-like protein isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU503638 | True | 201 | lncRNA | 0.58 | 1 | 79909160 | 79909360 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524638 | LOC106560389 | coding | downstream | 12421 | 79865177 ~ 79896739 (-) |
| LOC118964535 | NA | coding | downstream | 302335 | 79536584 ~ 79606825 (-) |
| cdh2 | LOC106560349 | coding | downstream | 449653 | 79385540 ~ 79459507 (-) |
| LOC118964780 | NA | coding | downstream | 614775 | 79294259 ~ 79294385 (-) |
| LOC118964722 | LOC106584191 | coding | downstream | 626569 | 79243247 ~ 79282591 (-) |
| b4galt6 | LOC106560385 | coding | upstream | 78766 | 79988126 ~ 80016243 (-) |
| LOC110524643 | LOC106560384 | coding | upstream | 166336 | 80075696 ~ 80166743 (-) |
| LOC118964650 | LOC106581256 | coding | upstream | 283025 | 80192385 ~ 80197919 (-) |
| LOC118964651 | LOC106581256 | coding | upstream | 299052 | 80208412 ~ 80210788 (-) |
| LOC118964652 | LOC106581256 | coding | upstream | 301824 | 80211184 ~ 80213484 (-) |
| G444797 | NA | non-coding | downstream | 102336 | 79806511 ~ 79806824 (-) |
| G444794 | NA | non-coding | downstream | 103978 | 79804798 ~ 79805182 (-) |
| G444791 | NA | non-coding | downstream | 105430 | 79803477 ~ 79803730 (-) |
| G444788 | NA | non-coding | downstream | 106171 | 79802412 ~ 79802989 (-) |
| G444780 | LOC100194703 | non-coding | downstream | 109887 | 79798987 ~ 79799273 (-) |
| G445070 | NA | non-coding | upstream | 16434 | 79925794 ~ 79926468 (-) |
| G445074 | NA | non-coding | upstream | 22741 | 79932101 ~ 79936292 (-) |
| G445086 | NA | non-coding | upstream | 39893 | 79949253 ~ 79949580 (-) |
| G445103 | NA | non-coding | upstream | 58964 | 79968324 ~ 79968599 (-) |
| G445104 | NA | non-coding | upstream | 59818 | 79969178 ~ 79969484 (-) |
| G444691 | LOC106605670 | other | downstream | 177624 | 79730987 ~ 79731536 (-) |
| LOC110524635 | LOC106560345 | other | downstream | 671699 | 79219153 ~ 79237461 (-) |
| G444001 | NA | other | downstream | 943131 | 78964631 ~ 78966029 (-) |
| G442807 | NA | other | downstream | 1827150 | 78081745 ~ 78082010 (-) |
| G442381 | rpl5 | other | downstream | 2281946 | 77623299 ~ 77627214 (-) |
| G445115 | NA | other | upstream | 73101 | 79982461 ~ 79987704 (-) |
| G445197 | NA | other | upstream | 267402 | 80176762 ~ 80177080 (-) |
| LOC118964653 | LOC106581256 | other | upstream | 316115 | 80223240 ~ 80233361 (-) |
| G445220 | NA | other | upstream | 336583 | 80245943 ~ 80261505 (-) |
| G446775 | NA | other | upstream | 2033925 | 81943285 ~ 81943611 (-) |
