G445086



Basic Information


Item Value
gene id G445086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 79949253 ~ 79949580 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU503670
taactctgggcggttgatggtttttgcaactgcacttgaataatatggacttggtattttaccaagtcgggctatcttctgtataccacccctaccatgtcacaacacaactgattggtcaaacagattaagaaggaaagaaattacacaaatgaacttttaacaaggtacacctgttaattgaaatgcattccaggtgactaccgcatgaagctggttgagagaatgccaagagtgtgtaaagctgtcatcaaggcaaagggtggctgctttgaataatctcaaatgtaaaatatgttttgatttggttactacatgattcaatatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU503670 True 328 lncRNA 0.38 1 79949253 79949580

Neighbor


gene id symbol gene type direction distance location
LOC110524638 LOC106560389 coding downstream 52514 79865177 ~ 79896739 (-)
LOC118964535 NA coding downstream 342428 79536584 ~ 79606825 (-)
cdh2 LOC106560349 coding downstream 489746 79385540 ~ 79459507 (-)
LOC118964780 NA coding downstream 654868 79294259 ~ 79294385 (-)
LOC118964722 LOC106584191 coding downstream 666662 79243247 ~ 79282591 (-)
b4galt6 LOC106560385 coding upstream 38546 79988126 ~ 80016243 (-)
LOC110524643 LOC106560384 coding upstream 126116 80075696 ~ 80166743 (-)
LOC118964650 LOC106581256 coding upstream 242805 80192385 ~ 80197919 (-)
LOC118964651 LOC106581256 coding upstream 258832 80208412 ~ 80210788 (-)
LOC118964652 LOC106581256 coding upstream 261604 80211184 ~ 80213484 (-)
G445074 NA non-coding downstream 12961 79932101 ~ 79936292 (-)
G445070 NA non-coding downstream 22785 79925794 ~ 79926468 (-)
G445055 NA non-coding downstream 39893 79909160 ~ 79909360 (-)
G444797 NA non-coding downstream 142429 79806511 ~ 79806824 (-)
G444794 NA non-coding downstream 144071 79804798 ~ 79805182 (-)
G445103 NA non-coding upstream 18744 79968324 ~ 79968599 (-)
G445104 NA non-coding upstream 19598 79969178 ~ 79969484 (-)
G445107 NA non-coding upstream 21398 79970978 ~ 79971212 (-)
G445108 LOC106560363 non-coding upstream 22799 79972379 ~ 79972671 (-)
G445110 LOC106560363 non-coding upstream 24634 79974214 ~ 79974572 (-)
G444691 LOC106605670 other downstream 217717 79730987 ~ 79731536 (-)
LOC110524635 LOC106560345 other downstream 711792 79219153 ~ 79237461 (-)
G444001 NA other downstream 983224 78964631 ~ 78966029 (-)
G442807 NA other downstream 1867243 78081745 ~ 78082010 (-)
G442381 rpl5 other downstream 2322039 77623299 ~ 77627214 (-)
G445115 NA other upstream 32881 79982461 ~ 79987704 (-)
G445197 NA other upstream 227182 80176762 ~ 80177080 (-)
LOC118964653 LOC106581256 other upstream 275895 80223240 ~ 80233361 (-)
G445220 NA other upstream 296363 80245943 ~ 80261505 (-)
G446775 NA other upstream 1993705 81943285 ~ 81943611 (-)

Expression



Co-expression Network