Gene
RNA
| Item | Value |
|---|---|
| gene id | G445117 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 80001280 ~ 80001644 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU503709 | True | 244 | lncRNA | 0.50 | 2 | 80001280 | 80001644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524638 | LOC106560389 | coding | downstream | 104541 | 79865177 ~ 79896739 (-) |
| LOC118964535 | NA | coding | downstream | 394455 | 79536584 ~ 79606825 (-) |
| cdh2 | LOC106560349 | coding | downstream | 541773 | 79385540 ~ 79459507 (-) |
| LOC118964780 | NA | coding | downstream | 706895 | 79294259 ~ 79294385 (-) |
| LOC118964722 | LOC106584191 | coding | downstream | 718689 | 79243247 ~ 79282591 (-) |
| LOC110524643 | LOC106560384 | coding | upstream | 74052 | 80075696 ~ 80166743 (-) |
| LOC118964650 | LOC106581256 | coding | upstream | 190741 | 80192385 ~ 80197919 (-) |
| LOC118964651 | LOC106581256 | coding | upstream | 206768 | 80208412 ~ 80210788 (-) |
| LOC118964652 | LOC106581256 | coding | upstream | 209540 | 80211184 ~ 80213484 (-) |
| LOC118964653 | LOC106581256 | coding | upstream | 221596 | 80223240 ~ 80233361 (-) |
| G445115 | NA | non-coding | downstream | 15556 | 79982461 ~ 79987704 (-) |
| G445110 | LOC106560363 | non-coding | downstream | 26708 | 79974214 ~ 79974572 (-) |
| G445108 | LOC106560363 | non-coding | downstream | 28609 | 79972379 ~ 79972671 (-) |
| G445107 | NA | non-coding | downstream | 30068 | 79970978 ~ 79971212 (-) |
| G445104 | NA | non-coding | downstream | 31796 | 79969178 ~ 79969484 (-) |
| G445118 | NA | non-coding | upstream | 18964 | 80020608 ~ 80023313 (-) |
| G445120 | NA | non-coding | upstream | 22961 | 80024605 ~ 80024815 (-) |
| G445122 | NA | non-coding | upstream | 25560 | 80027204 ~ 80027482 (-) |
| G445127 | NA | non-coding | upstream | 35061 | 80036705 ~ 80036919 (-) |
| G445134 | NA | non-coding | upstream | 47403 | 80049047 ~ 80049341 (-) |
| G444691 | LOC106605670 | other | downstream | 269744 | 79730987 ~ 79731536 (-) |
| LOC110524635 | LOC106560345 | other | downstream | 763819 | 79219153 ~ 79237461 (-) |
| G444001 | NA | other | downstream | 1035251 | 78964631 ~ 78966029 (-) |
| G442807 | NA | other | downstream | 1919270 | 78081745 ~ 78082010 (-) |
| G445197 | NA | other | upstream | 175118 | 80176762 ~ 80177080 (-) |
| G445220 | NA | other | upstream | 244299 | 80245943 ~ 80261505 (-) |
| G446775 | NA | other | upstream | 1941641 | 81943285 ~ 81943611 (-) |
| G447220 | NA | other | upstream | 2389011 | 82390655 ~ 82391224 (-) |
