Gene
RNA
| Item | Value |
|---|---|
| gene id | G445127 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 80036705 ~ 80036919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| remodeling and spacing factor 1 isoform X3 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU503719 | True | 215 | lncRNA | 0.45 | 1 | 80036705 | 80036919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| b4galt6 | LOC106560385 | coding | downstream | 20462 | 79988126 ~ 80016243 (-) |
| LOC110524638 | LOC106560389 | coding | downstream | 139966 | 79865177 ~ 79896739 (-) |
| LOC118964535 | NA | coding | downstream | 429880 | 79536584 ~ 79606825 (-) |
| cdh2 | LOC106560349 | coding | downstream | 577198 | 79385540 ~ 79459507 (-) |
| LOC118964780 | NA | coding | downstream | 742320 | 79294259 ~ 79294385 (-) |
| LOC110524643 | LOC106560384 | coding | upstream | 38777 | 80075696 ~ 80166743 (-) |
| LOC118964650 | LOC106581256 | coding | upstream | 155466 | 80192385 ~ 80197919 (-) |
| LOC118964651 | LOC106581256 | coding | upstream | 171493 | 80208412 ~ 80210788 (-) |
| LOC118964652 | LOC106581256 | coding | upstream | 174265 | 80211184 ~ 80213484 (-) |
| LOC118964653 | LOC106581256 | coding | upstream | 186321 | 80223240 ~ 80233361 (-) |
| G445122 | NA | non-coding | downstream | 9223 | 80027204 ~ 80027482 (-) |
| G445120 | NA | non-coding | downstream | 11890 | 80024605 ~ 80024815 (-) |
| G445118 | NA | non-coding | downstream | 13392 | 80020608 ~ 80023313 (-) |
| G445117 | NA | non-coding | downstream | 35061 | 80001280 ~ 80001644 (-) |
| G445115 | NA | non-coding | downstream | 50981 | 79982461 ~ 79987704 (-) |
| G445134 | NA | non-coding | upstream | 12128 | 80049047 ~ 80049341 (-) |
| G445142 | NA | non-coding | upstream | 21829 | 80058748 ~ 80059066 (-) |
| G445151 | NA | non-coding | upstream | 34831 | 80071750 ~ 80071955 (-) |
| G445152 | NA | non-coding | upstream | 36515 | 80073434 ~ 80073714 (-) |
| G445173 | NA | non-coding | upstream | 113001 | 80149920 ~ 80150166 (-) |
| G444691 | LOC106605670 | other | downstream | 305169 | 79730987 ~ 79731536 (-) |
| LOC110524635 | LOC106560345 | other | downstream | 799244 | 79219153 ~ 79237461 (-) |
| G444001 | NA | other | downstream | 1070676 | 78964631 ~ 78966029 (-) |
| G442807 | NA | other | downstream | 1954695 | 78081745 ~ 78082010 (-) |
| G445197 | NA | other | upstream | 139843 | 80176762 ~ 80177080 (-) |
| G445220 | NA | other | upstream | 209024 | 80245943 ~ 80261505 (-) |
| G446775 | NA | other | upstream | 1906366 | 81943285 ~ 81943611 (-) |
| G447220 | NA | other | upstream | 2353736 | 82390655 ~ 82391224 (-) |
