G445134



Basic Information


Item Value
gene id G445134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80049047 ~ 80049341 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU503727
ttggtacccttccccagagctgtgcctcgacacaatcctgtctcggagctctatggacaattcctttgacctcatggcttggtttttgctctgacatgcactgtcaactgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaatggaatttaccacaggtggactcaaatcaatttgtagaaacatctcaaggatggtcaatggaaacagggtgcatctgagctcaatttcgagtcttataggaaagggtctgaatacttatgtgaataaggtatCAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU503727 True 295 lncRNA 0.44 1 80049047 80049341

Neighbor


gene id symbol gene type direction distance location
b4galt6 LOC106560385 coding downstream 32804 79988126 ~ 80016243 (-)
LOC110524638 LOC106560389 coding downstream 152308 79865177 ~ 79896739 (-)
LOC118964535 NA coding downstream 442222 79536584 ~ 79606825 (-)
cdh2 LOC106560349 coding downstream 589540 79385540 ~ 79459507 (-)
LOC118964780 NA coding downstream 754662 79294259 ~ 79294385 (-)
LOC110524643 LOC106560384 coding upstream 26355 80075696 ~ 80166743 (-)
LOC118964650 LOC106581256 coding upstream 143044 80192385 ~ 80197919 (-)
LOC118964651 LOC106581256 coding upstream 159071 80208412 ~ 80210788 (-)
LOC118964652 LOC106581256 coding upstream 161843 80211184 ~ 80213484 (-)
LOC118964653 LOC106581256 coding upstream 173899 80223240 ~ 80233361 (-)
G445127 NA non-coding downstream 12128 80036705 ~ 80036919 (-)
G445122 NA non-coding downstream 21565 80027204 ~ 80027482 (-)
G445120 NA non-coding downstream 24232 80024605 ~ 80024815 (-)
G445118 NA non-coding downstream 25734 80020608 ~ 80023313 (-)
G445117 NA non-coding downstream 47403 80001280 ~ 80001644 (-)
G445142 NA non-coding upstream 9407 80058748 ~ 80059066 (-)
G445151 NA non-coding upstream 22409 80071750 ~ 80071955 (-)
G445152 NA non-coding upstream 24093 80073434 ~ 80073714 (-)
G445173 NA non-coding upstream 100579 80149920 ~ 80150166 (-)
G445174 NA non-coding upstream 103057 80152398 ~ 80152732 (-)
G445115 NA other downstream 61343 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 317511 79730987 ~ 79731536 (-)
LOC110524635 LOC106560345 other downstream 811586 79219153 ~ 79237461 (-)
G444001 NA other downstream 1083018 78964631 ~ 78966029 (-)
G442807 NA other downstream 1967037 78081745 ~ 78082010 (-)
G445197 NA other upstream 127421 80176762 ~ 80177080 (-)
G445220 NA other upstream 196602 80245943 ~ 80261505 (-)
G446775 NA other upstream 1893944 81943285 ~ 81943611 (-)
G447220 NA other upstream 2341314 82390655 ~ 82391224 (-)

Expression



Co-expression Network