G445189


Basic Information

Item Value
gene id G445189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80171543 ~ 80172033 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU503783
gtccttttcgcagattattttcaaaggagtaaaggaggagcttcctttctcagaaaggactctatagatgtaagatattttgcctttaatggattgtgctgtgacaagaagggtttcaacttcattcaactgagttctaaacctcctcttggaggtaaatgaggaaattacatgtctaatttggaagatatttgaaaaaatgggatcttggcacatcgaattcactgcagagctcttgaaaggatttcagtgtagtggttttctgatgaaataggtctgaaaaggtcctgattcctagagtatgccaaagattaaagttggcctccctcagggcttttggcaagtctgggttgcccactataggcgagtgagaacatatttgggaggaaatgcccaggtatttcttacagtccctccatgctagtagggtgctgtaaatcacaaaggttttggctatgttgcccacttcactaaagttattaatgaatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU503783 True 491 lncRNA 0.40 1 80171543 80172033

Neighbor

gene id symbol gene type direction distance location
LOC110524643 LOC106560384 coding downstream 4800 80075696 ~ 80166743 (-)
b4galt6 LOC106560385 coding downstream 155300 79988126 ~ 80016243 (-)
LOC110524638 LOC106560389 coding downstream 274804 79865177 ~ 79896739 (-)
LOC118964535 NA coding downstream 564718 79536584 ~ 79606825 (-)
cdh2 LOC106560349 coding downstream 712036 79385540 ~ 79459507 (-)
LOC118964650 LOC106581256 coding upstream 20352 80192385 ~ 80197919 (-)
LOC118964651 LOC106581256 coding upstream 36379 80208412 ~ 80210788 (-)
LOC118964652 LOC106581256 coding upstream 39151 80211184 ~ 80213484 (-)
LOC118964653 LOC106581256 coding upstream 51207 80223240 ~ 80233361 (-)
LOC118964655 LOC106581256 coding upstream 68966 80240999 ~ 80244648 (-)
G445174 NA non-coding downstream 18811 80152398 ~ 80152732 (-)
G445173 NA non-coding downstream 21377 80149920 ~ 80150166 (-)
G445152 NA non-coding downstream 97829 80073434 ~ 80073714 (-)
G445151 NA non-coding downstream 99588 80071750 ~ 80071955 (-)
G445142 NA non-coding downstream 112477 80058748 ~ 80059066 (-)
G445191 NA non-coding upstream 204 80172237 ~ 80172621 (-)
G445202 NA non-coding upstream 28917 80200950 ~ 80201243 (-)
G445206 NA non-coding upstream 48605 80220638 ~ 80220893 (-)
G445217 NA non-coding upstream 70553 80242586 ~ 80242951 (-)
LOC118964724 NA non-coding upstream 133054 80282518 ~ 80308754 (-)
G445115 NA other downstream 183839 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 440007 79730987 ~ 79731536 (-)
LOC110524635 LOC106560345 other downstream 934082 79219153 ~ 79237461 (-)
G444001 NA other downstream 1205514 78964631 ~ 78966029 (-)
G442807 NA other downstream 2089533 78081745 ~ 78082010 (-)
G445197 NA other upstream 4729 80176762 ~ 80177080 (-)
G445220 NA other upstream 73910 80245943 ~ 80261505 (-)
G446775 NA other upstream 1771252 81943285 ~ 81943611 (-)
G447220 NA other upstream 2218622 82390655 ~ 82391224 (-)

Expression


Co-expression Network