G445225 (LOC106581256)



Basic Information


Item Value
gene id G445225
gene name LOC106581256
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80311600 ~ 80311884 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU503823
tcaacagagtgatgagaaaacctcagagtacactgaggccacacccaaaggctcacagtctggtttggaagtatctgagaagaagatctggacaactgcaaagactatttaccacaatgtgaagacaaagatgaggaattattttacatggcaaaatcaagtcaaagcaacaacggctcaagccAAAAAGACCCTCAGCCATATTCTGGTTATAATTCAGAAAGAGctgtcaaaatctgaccaaaCGGTGACTGCGCTTTCACAAATAGAGCATGTGGTTGGAAT

Function


NR:

description
uncharacterized protein LOC110516461, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU503823 True 285 lncRNA 0.42 1 80311600 80311884

Neighbor


gene id symbol gene type direction distance location
LOC118964724 NA coding downstream 2846 80282518 ~ 80308754 (-)
LOC118936654 LOC106581256 coding downstream 9580 80288087 ~ 80302020 (-)
LOC118964656 LOC106581256 coding downstream 21422 80288573 ~ 80290178 (-)
LOC110514042 LOC106581256 coding downstream 41299 80268607 ~ 80270301 (-)
LOC118964723 NA coding downstream 47040 80247693 ~ 80264560 (-)
LOC118964725 NA coding upstream 1940 80313824 ~ 80380303 (-)
LOC118964659 LOC106581256 coding upstream 11578 80323462 ~ 80326940 (-)
LOC118964657 LOC106581256 coding upstream 27233 80339117 ~ 80340580 (-)
LOC118964658 LOC106581256 coding upstream 89147 80401031 ~ 80403359 (-)
LOC118964726 NA coding upstream 92919 80404803 ~ 80412432 (-)
G445217 NA non-coding downstream 68649 80242586 ~ 80242951 (-)
G445206 NA non-coding downstream 90707 80220638 ~ 80220893 (-)
G445202 NA non-coding downstream 110357 80200950 ~ 80201243 (-)
G445191 NA non-coding downstream 138979 80172237 ~ 80172621 (-)
G445226 LOC106581256 non-coding upstream 411 80312295 ~ 80312631 (-)
G445230 NA non-coding upstream 23866 80335750 ~ 80335953 (-)
G445244 NA non-coding upstream 75747 80387631 ~ 80388000 (-)
G445245 NA non-coding upstream 76763 80388647 ~ 80388868 (-)
G445247 NA non-coding upstream 81588 80393472 ~ 80393693 (-)
G445220 NA other downstream 50095 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 85399 80223240 ~ 80233361 (-)
G445197 NA other downstream 134520 80176762 ~ 80177080 (-)
G445115 NA other downstream 323896 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 580064 79730987 ~ 79731536 (-)
G446775 NA other upstream 1631401 81943285 ~ 81943611 (-)
G447220 NA other upstream 2078771 82390655 ~ 82391224 (-)
G447993 NA other upstream 3005629 83315161 ~ 83319715 (-)
G448079 NA other upstream 3198469 83510353 ~ 83520273 (-)
G448411 NA other upstream 3559718 83871602 ~ 83873308 (-)

Expression



Co-expression Network