G445244



Basic Information


Item Value
gene id G445244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80387631 ~ 80388000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU503843
tgttatataaatattcatacacatagctcatataaacaaagacattccgtcgtaagaacacatacacccagctataagactgaccccctcttccttatataaatatatatctcatctccctctaactggccggtcccaagagcaaagaacttttgctgtgcaccaatggggcccgctctggctagagcaaggcccgcctccaaccctccgaccagtcaagaagaccgaaacgacaagactccacctactttattctatgtataagaatgtatgtaaccattgtataggcctctttttcacctggctccttgccgagttatgtgaactaggtccgtgcacgtaaaactgcgggacaagatatctctgactc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU503843 True 370 lncRNA 0.45 1 80387631 80388000

Neighbor


gene id symbol gene type direction distance location
LOC118964725 NA coding downstream 7328 80313824 ~ 80380303 (-)
LOC118964657 LOC106581256 coding downstream 47051 80339117 ~ 80340580 (-)
LOC118964659 LOC106581256 coding downstream 60691 80323462 ~ 80326940 (-)
LOC118964724 NA coding downstream 78877 80282518 ~ 80308754 (-)
LOC118936654 LOC106581256 coding downstream 85611 80288087 ~ 80302020 (-)
LOC118964658 LOC106581256 coding upstream 13031 80401031 ~ 80403359 (-)
LOC118964726 NA coding upstream 16803 80404803 ~ 80412432 (-)
LOC118964727 LOC106581256 coding upstream 26943 80414943 ~ 80418042 (-)
LOC118964666 NA coding upstream 33087 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding upstream 43152 80431152 ~ 80434587 (-)
G445230 NA non-coding downstream 51678 80335750 ~ 80335953 (-)
G445226 LOC106581256 non-coding downstream 75000 80312295 ~ 80312631 (-)
G445225 LOC106581256 non-coding downstream 75747 80311600 ~ 80311884 (-)
G445217 NA non-coding downstream 144680 80242586 ~ 80242951 (-)
G445245 NA non-coding upstream 647 80388647 ~ 80388868 (-)
G445247 NA non-coding upstream 5472 80393472 ~ 80393693 (-)
G445248 NA non-coding upstream 6926 80394926 ~ 80395331 (-)
G445265 NA non-coding upstream 38026 80426026 ~ 80426401 (-)
G445267 NA non-coding upstream 42144 80430144 ~ 80430372 (-)
G445220 NA other downstream 126126 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 161430 80223240 ~ 80233361 (-)
G445197 NA other downstream 210551 80176762 ~ 80177080 (-)
G445115 NA other downstream 399927 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 656095 79730987 ~ 79731536 (-)
G446775 NA other upstream 1555285 81943285 ~ 81943611 (-)
G447220 NA other upstream 2002655 82390655 ~ 82391224 (-)
G447993 NA other upstream 2929513 83315161 ~ 83319715 (-)
G448079 NA other upstream 3122353 83510353 ~ 83520273 (-)
G448411 NA other upstream 3483602 83871602 ~ 83873308 (-)

Expression



Co-expression Network