Gene
RNA
| Item | Value |
|---|---|
| gene id | G445265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 80426026 ~ 80426401 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrovirus-related Pol polyprotein LINE-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU503865 | True | 376 | lncRNA | 0.42 | 1 | 80426026 | 80426401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964727 | LOC106581256 | coding | downstream | 7984 | 80414943 ~ 80418042 (-) |
| LOC118964726 | NA | coding | downstream | 13594 | 80404803 ~ 80412432 (-) |
| LOC118964658 | LOC106581256 | coding | downstream | 22667 | 80401031 ~ 80403359 (-) |
| LOC118964725 | NA | coding | downstream | 45723 | 80313824 ~ 80380303 (-) |
| LOC118964657 | LOC106581256 | coding | downstream | 85446 | 80339117 ~ 80340580 (-) |
| LOC118964663 | LOC106581256 | coding | upstream | 4751 | 80431152 ~ 80434587 (-) |
| LOC118964660 | LOC106581256 | coding | upstream | 28971 | 80455372 ~ 80462768 (-) |
| LOC118964664 | LOC106581256 | coding | upstream | 43105 | 80469506 ~ 80472720 (-) |
| LOC118964668 | LOC106581256 | coding | upstream | 47639 | 80474040 ~ 80477042 (-) |
| LOC118964665 | LOC106581256 | coding | upstream | 57456 | 80483857 ~ 80485280 (-) |
| G445248 | NA | non-coding | downstream | 30695 | 80394926 ~ 80395331 (-) |
| G445247 | NA | non-coding | downstream | 32333 | 80393472 ~ 80393693 (-) |
| G445245 | NA | non-coding | downstream | 37158 | 80388647 ~ 80388868 (-) |
| G445244 | NA | non-coding | downstream | 38026 | 80387631 ~ 80388000 (-) |
| G445230 | NA | non-coding | downstream | 90073 | 80335750 ~ 80335953 (-) |
| G445267 | NA | non-coding | upstream | 3743 | 80430144 ~ 80430372 (-) |
| LOC118964666 | NA | non-coding | upstream | 10832 | 80421087 ~ 80438415 (-) |
| G445518 | NA | non-coding | upstream | 231192 | 80657593 ~ 80661257 (-) |
| G445557 | NA | non-coding | upstream | 299370 | 80725771 ~ 80791140 (-) |
| G445596 | NA | non-coding | upstream | 377912 | 80804313 ~ 80806686 (-) |
| G445220 | NA | other | downstream | 164521 | 80245943 ~ 80261505 (-) |
| LOC118964653 | LOC106581256 | other | downstream | 199825 | 80223240 ~ 80233361 (-) |
| G445197 | NA | other | downstream | 248946 | 80176762 ~ 80177080 (-) |
| G445115 | NA | other | downstream | 438322 | 79982461 ~ 79987704 (-) |
| G444691 | LOC106605670 | other | downstream | 694490 | 79730987 ~ 79731536 (-) |
| G446775 | NA | other | upstream | 1516884 | 81943285 ~ 81943611 (-) |
| G447220 | NA | other | upstream | 1964254 | 82390655 ~ 82391224 (-) |
| G447993 | NA | other | upstream | 2891112 | 83315161 ~ 83319715 (-) |
| G448079 | NA | other | upstream | 3083952 | 83510353 ~ 83520273 (-) |
| G448411 | NA | other | upstream | 3445201 | 83871602 ~ 83873308 (-) |
