G446718


Basic Information

Item Value
gene id G446718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 81816197 ~ 81817170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU505498
gttgataaactatgaggctatttcttcacattataagcgcagcaatccTCCTACAGCAGTAGGCTGTAAGTGCAAATGTTCCATTACTAAGGAAAACACAATtttcaaaagtgaccacaaatgtgatGATTGCATGTAatacttttattataaaggtgcattctcatggtgaaaatgatcttccccaaacttcaaACTCACGCGTCTCGTATGTATGCAAGTTTGgctttacaacaggtgtagaacctaTTTAATGTActgttatttggccactttagtgtTGATACAAACCAtttcaaaacatataggcctatggacatgaggtgtgtgactatgatttgaaaaagtagcAAAAAAAAGGTATGCGTTTCTGGCCTTACCTCAcacaagctgggcatcattcacaaatcagtctgatgggtgacaatgtcagcctattcttgatttaatctggtctttacatatactaaataatataggTGTGAAatattttgatttagaatggaccattatcatgtaCCTGTCTCAAATCAGGGAAAGGGGAAAAAATAAATGTCAtatatgcaCTTAAATAGTGGAGGACGAttttcccatggttcattttcatgccagccaggtaggctatactcctgttgtaaagagaagcaatgtgcttaatattaggaaagttgtgaaataaatatagtaggcctagcctattgAACGCTGATGGGAtcatcctctttttaatagaggccatcactctgtatTTTTCATGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU505498 True 759 lncRNA 0.36 2 81816197 81817170

Neighbor

gene id symbol gene type direction distance location
LOC110524665 slc22a23 coding downstream 48602 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 178606 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 226965 81580318 ~ 81589232 (-)
LOC110524661 LOC106560372 coding downstream 537004 81277266 ~ 81279193 (-)
LOC110524660 LOC106560371 coding downstream 545141 81265457 ~ 81271056 (-)
LOC110524669 LOC106584070 coding upstream 26349 81843519 ~ 81889913 (-)
igfbp3 igfbp-3a1 coding upstream 457917 82275087 ~ 82346684 (-)
si:ch211-191a24.3 LOC106560396 coding upstream 616045 82433215 ~ 82536323 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 784290 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 1149814 82966984 ~ 82974589 (-)
G446687 NA non-coding downstream 44327 81771577 ~ 81771870 (-)
G446686 NA non-coding downstream 47082 81768863 ~ 81769115 (-)
G446684 NA non-coding downstream 54361 81761636 ~ 81761836 (-)
G446682 NA non-coding downstream 56242 81759622 ~ 81759955 (-)
G446680 NA non-coding downstream 59315 81756623 ~ 81756882 (-)
G446744 NA non-coding upstream 62267 81879437 ~ 81879840 (-)
G446774 NA non-coding upstream 124200 81941370 ~ 81941810 (-)
G446778 NA non-coding upstream 132031 81949201 ~ 81949441 (-)
G446799 NA non-coding upstream 156449 81973619 ~ 82053804 (-)
G446814 NA non-coding upstream 202637 82019807 ~ 82045817 (-)
G445220 NA other downstream 1554692 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 1589996 80223240 ~ 80233361 (-)
G445197 NA other downstream 1639117 80176762 ~ 80177080 (-)
G445115 NA other downstream 1828493 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 2084661 79730987 ~ 79731536 (-)
G446775 NA other upstream 126115 81943285 ~ 81943611 (-)
G447220 NA other upstream 573485 82390655 ~ 82391224 (-)
G447993 NA other upstream 1500343 83315161 ~ 83319715 (-)
G448079 NA other upstream 1693183 83510353 ~ 83520273 (-)
G448411 NA other upstream 2054432 83871602 ~ 83873308 (-)

Expression


Co-expression Network