G446799


Basic Information

Item Value
gene id G446799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 81973619 ~ 82053804 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU505584
gtgtaacttcaggaagccataatgtgagagaatgtaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccatagtgtgacagtgtaacttcaggaagccataatgtcagagagtgtaacttcaggaagccataatgtgagagtgcaacttcaggaagccataatgtgagagagagcaaattcaggaagccacaatgtgagagagtgcaacttcaggaagccacaatgtgagagagtgcaacttcaggaagccataatgtgagagagtgtaacttcaataagccaaaatgtgagagagtgtaaatttaggaaggcataatgtgagagtgtaacttcaggaagccatgatgtgagagaatgtaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgtgagagagtgcaacttcaggaagccataatgtgagagagtgtaaatttaggaggccataatgtgagagagtgtaacttcagcaagccataatgtgagagtgtaacttcattaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagaatgtaacttcagtaagccataatgtgagagtgtaacttcagtaagacataatgtgagagagtgcaacttcaggaagccataatgtgagagagtgtaaatttaggaggccataatgtgagagagtgtaacttcaggaagccataatgtgagagtgtaacttcattaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcaggaagccataattttagagagtgtaacttcaggaagccataatgtgagagtgtaacttcagtaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagtgtaacttcattaagccataatgagagtgtaacttcagtaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgttagagagtgtaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgcaagagagtgtaacttcaggaagccataatgtgagagtttaacttcaggaagccataatgtgagagtttaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgtaagagagtgtaacttcaggaagccataatgtgagagtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU505584 True 1325 lncRNA 0.40 3 81973619 82053804

Neighbor

gene id symbol gene type direction distance location
LOC110524669 LOC106584070 coding downstream 83706 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 206024 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 336028 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 384387 81580318 ~ 81589232 (-)
LOC110524661 LOC106560372 coding downstream 694426 81277266 ~ 81279193 (-)
igfbp3 igfbp-3a1 coding upstream 221283 82275087 ~ 82346684 (-)
si:ch211-191a24.3 LOC106560396 coding upstream 379411 82433215 ~ 82536323 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 547656 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 913180 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 927645 82981449 ~ 83097063 (-)
G446778 NA non-coding downstream 24178 81949201 ~ 81949441 (-)
G446774 NA non-coding downstream 31809 81941370 ~ 81941810 (-)
G446744 NA non-coding downstream 93779 81879437 ~ 81879840 (-)
G446691 NA non-coding downstream 100461 81776894 ~ 81873158 (-)
G446841 NA non-coding upstream 20046 82073850 ~ 82074070 (-)
G446842 NA non-coding upstream 22460 82076264 ~ 82077060 (-)
G446844 NA non-coding upstream 33781 82087585 ~ 82087797 (-)
G446845 NA non-coding upstream 34090 82087894 ~ 82116762 (-)
G446858 NA non-coding upstream 55411 82109215 ~ 82110638 (-)
G446775 NA other downstream 30008 81943285 ~ 81943611 (-)
G445220 NA other downstream 1712114 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 1747418 80223240 ~ 80233361 (-)
G445197 NA other downstream 1796539 80176762 ~ 80177080 (-)
G445115 NA other downstream 1985915 79982461 ~ 79987704 (-)
G447220 NA other upstream 336851 82390655 ~ 82391224 (-)
G447993 NA other upstream 1263709 83315161 ~ 83319715 (-)
G448079 NA other upstream 1456549 83510353 ~ 83520273 (-)
G448411 NA other upstream 1817798 83871602 ~ 83873308 (-)
G448452 NA other upstream 1862332 83916136 ~ 83916641 (-)

Expression


Co-expression Network