G446814


Basic Information

Item Value
gene id G446814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82019807 ~ 82045817 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU505602
atgtgagagagtgtaaatttaggaggccataatgtgagagagtgtaacttcagtaagccataatgtgagagtataacttcagtaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcaggaagccataattttagagagtgtaacttcaggaagccataatgtgagagtgtaacttcagtaagccataatgtgagagtataacttcagtaagccataatgtgagagagtgtaacttcaggaagccataattttagagagtgtaacttcaggaagccataatgtgagagtgtaacttcattaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgttagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataattttagagagtgtaacttcaggaagccataatgtgagagtgtaacttcattaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgttagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgtgagagtgtaaattcagtaagccataatgtgagagagtgtaacttcagtaagccaaaatgtgagagagtgtaaatttaggaagccatagtgtgagagtgtaacttcgggaagccataatgtgaaagagtgcaacttcaggaagccataatgtcagagagtgtaacttcagtaagcaataatgtgagagatTGCAACTTCAGaaagccataatgtgagtgtaacttcagggagccaaaatgtgagagagtgcaacttcaggaagccacaatgtgagagagtgcaacttcaggaagccataatgtgagggaatgtaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgtgagagagtgcaacttcaggaagccataatgtgagagagagtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgttagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagtgtaacttcaggaagccataatgtgagagtgtaacttcattaagccataatgtgagtgtaacttcagtaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgttagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcagtaagccataatgtgagagtgtaacttcaggaagccataatgtgagagtgtaacttcagtaagccataatgtgagagagtgtaacttcagtaagccaaaatgtgagagagtgtaaatttaggaagccatagtgtgagagtgtaacttcgggaagccataatgtgaaagagtgcaacttcaggaagccataatgtcagagagtgtaacttcagtaagcaataatgtgagagatTGCAACTTCAGaaagccataatgtgagtgtaacttcagggagccaaaatgtgagagagtgcaacttcaggaagccacaatgttagagagtgcaacttcaggaagccataatgtgagggaatgtaacttcagtaagccataatgtgagagtgtaacttcagtaagccataatgtgagagagtgcaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagagtgtaacttcaggaagccataatgttagagagtgtaacttcaggaagccataatgtgagagtgtaacttcaggaagccataatgtgagagagtgtaacttctgcaggaagccataatgtgagagagtgtaacttcaggaagccataatgtgagagtgtaacttcaggaagccataatgtgag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU505602 True 2205 lncRNA 0.40 2 82019807 82045817

Neighbor

gene id symbol gene type direction distance location
LOC110524669 LOC106584070 coding downstream 129894 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 252212 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 382216 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 430575 81580318 ~ 81589232 (-)
LOC110524661 LOC106560372 coding downstream 740614 81277266 ~ 81279193 (-)
igfbp3 igfbp-3a1 coding upstream 229270 82275087 ~ 82346684 (-)
si:ch211-191a24.3 LOC106560396 coding upstream 387398 82433215 ~ 82536323 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 555643 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 921167 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 935632 82981449 ~ 83097063 (-)
G446778 NA non-coding downstream 70366 81949201 ~ 81949441 (-)
G446774 NA non-coding downstream 77997 81941370 ~ 81941810 (-)
G446744 NA non-coding downstream 139967 81879437 ~ 81879840 (-)
G446674 NA non-coding downstream 194102 81794081 ~ 81825705 (-)
G446841 NA non-coding upstream 28033 82073850 ~ 82074070 (-)
G446842 NA non-coding upstream 30447 82076264 ~ 82077060 (-)
G446844 NA non-coding upstream 41768 82087585 ~ 82087797 (-)
G446845 NA non-coding upstream 42077 82087894 ~ 82116762 (-)
G446858 NA non-coding upstream 63398 82109215 ~ 82110638 (-)
G446775 NA other downstream 76196 81943285 ~ 81943611 (-)
G445220 NA other downstream 1758302 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 1793606 80223240 ~ 80233361 (-)
G445197 NA other downstream 1842727 80176762 ~ 80177080 (-)
G445115 NA other downstream 2032103 79982461 ~ 79987704 (-)
G447220 NA other upstream 344838 82390655 ~ 82391224 (-)
G447993 NA other upstream 1271696 83315161 ~ 83319715 (-)
G448079 NA other upstream 1464536 83510353 ~ 83520273 (-)
G448411 NA other upstream 1825785 83871602 ~ 83873308 (-)
G448452 NA other upstream 1870319 83916136 ~ 83916641 (-)

Expression


Co-expression Network