G446869


Basic Information

Item Value
gene id G446869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82130951 ~ 82131895 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU505663
acccaaccctgcacatacgcactcacacaggcacacacgcaacgcactcacgcaggcacacacgcactcacacaggcacacacgcactcacgcaggcacacacacactcacacaggtacacacgcactcacacaggcacacacgcactcacacaggcacacacgcactcacacaggcacacacgcactcacacaggcacacacgcaacgcactcacacaggcacacacgcaacacactcacacaggcacacatgcaacgcactcacacaggcactcacgcaggcacacacgcaacgcactcacacaggcacacacgcactcacacaggcacacacgcactcacacagacacacgcactcacacaggcacacacgcaacGCATTCACACAGGCACACGCGCAACgcactcacacaggcacacacgcaacacactcacacaggcacacacgcaacgcactcacgcaggcacacacgcaacacactcacgcaggcacacacgcaacgcactcacacaggcacacacacaaacatacacacatacacccacacatacatatacacacaatcaCAGTTGTTCTGTTCTCTGGGTCTTTGTGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU505663 True 600 lncRNA 0.57 2 82130951 82131895

Neighbor

gene id symbol gene type direction distance location
LOC110524669 LOC106584070 coding downstream 241038 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 363356 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 493360 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 541719 81580318 ~ 81589232 (-)
LOC110524661 LOC106560372 coding downstream 851758 81277266 ~ 81279193 (-)
igfbp3 igfbp-3a1 coding upstream 143192 82275087 ~ 82346684 (-)
si:ch211-191a24.3 LOC106560396 coding upstream 301320 82433215 ~ 82536323 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 469565 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 835089 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 849554 82981449 ~ 83097063 (-)
G446845 NA non-coding downstream 14189 82087894 ~ 82116762 (-)
G446858 NA non-coding downstream 20313 82109215 ~ 82110638 (-)
G446844 NA non-coding downstream 43154 82087585 ~ 82087797 (-)
G446842 NA non-coding downstream 53891 82076264 ~ 82077060 (-)
G446841 NA non-coding downstream 56881 82073850 ~ 82074070 (-)
G446884 NA non-coding upstream 23308 82155203 ~ 82156230 (-)
G446885 NA non-coding upstream 25564 82157459 ~ 82158420 (-)
G446889 NA non-coding upstream 40745 82172640 ~ 82184358 (-)
G446919 NA non-coding upstream 80329 82212224 ~ 82214540 (-)
G447168 NA non-coding upstream 93834 82225729 ~ 82256822 (-)
G446775 NA other downstream 187340 81943285 ~ 81943611 (-)
G445220 NA other downstream 1869446 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 1904750 80223240 ~ 80233361 (-)
G445197 NA other downstream 1953871 80176762 ~ 80177080 (-)
G445115 NA other downstream 2143247 79982461 ~ 79987704 (-)
G447220 NA other upstream 258760 82390655 ~ 82391224 (-)
G447993 NA other upstream 1185618 83315161 ~ 83319715 (-)
G448079 NA other upstream 1378458 83510353 ~ 83520273 (-)
G448411 NA other upstream 1739707 83871602 ~ 83873308 (-)
G448452 NA other upstream 1784241 83916136 ~ 83916641 (-)

Expression


Co-expression Network