G447261


Basic Information

Item Value
gene id G447261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82500216 ~ 82502558 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU506150
ggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctgctgaaggactaggtattgtaacatctctccagAAGGACTAGGTGTTGTAACATCTCTCCagaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctccagaaggaataggtattgtaacatctctcctgaatgactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactatgtattgtaacatctctcctgaaggactatgtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatctctgctgaaggactaggtattgtaacatctctgctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactaggtattgtaacatctctcctgaaggactatgtattgtaacatctctcctgaaggactaggtattgtaacatctctccagaaggactaggtattgtaacatatctcctgaaggactaggtattgtaacatctctctagaaggactaggtattgtaacatctctctagaaggactaggtattgtaacatctctccagAAGGACTAGAAATTGTAACATCTCTCCAGAAGGATTAGgtattgtcacacacacacacagacactacccTGGACCAGACGACTGTAACAATCACTACAGCCAGTGGTTGAGGTTTGAGTCCCAGCTGTTTTAAACCAGGTCTATATCGGCAGCCATGTCATTTAGACAGACCGCGCATTGGGAAAGCAATGTGGCAAGGCACCATGCAAACAGTTATgcaaacatatgcacacacacacactcgcaaacacacacacacgcgcacacacatgcacacacacacacagacacggtaTATTAACAGGTAAACAGacaaactcacacacagacataatgAGGGTGCCAGCCTGTGAAAAAGAAAAAACAGAAACTCAGAAGAATGTTGTTTTCAGCCACAGATGGTTCAGTTTGaacccccttctctttctctctatatgttaaactgtctctttctctctcccctctctccccccccccctctctctccttctctctccccctctccatccccctctctccactccccccccctctctctctctctcacccactctctctctccctgtctctttccagctctctccttctctacctttcccttctccctctcccttctctctcgctaCATATCACTCTCTACATATCACCTCTGTCTTGTACCTTTCTCTCCtatgtctctcttctccccctttctaCTTTGTCAGGTTCAGGTTGCAGGTTTCCATACCGTCCCCCTGGAGGTACTGAGAGAGGAAGGcaaagagtgagagtgagagagagagagatacccagaGCAAAACAGAATCTTTTGGAGTGTAAGAGTAGGCGGTGAGTCAAGCgcttaaaggagagagagagataggggaagagagaaggagagagagagagatagagagagataggggaagagagaaggagagagagagagagggaagagaaggagagagagagagagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106574060

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU506150 True 1969 lncRNA 0.45 3 82500216 82502558

Neighbor

gene id symbol gene type direction distance location
igfbp3 igfbp-3a1 coding downstream 153532 82275087 ~ 82346684 (-)
LOC110524669 LOC106584070 coding downstream 610303 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 732621 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 862625 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 910984 81580318 ~ 81589232 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 98902 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 464426 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 478891 82981449 ~ 83097063 (-)
adcyap1r1b adcyap1r1 coding upstream 738649 83241207 ~ 83306242 (-)
LOC110524681 LOC106560421 coding upstream 1082178 83584736 ~ 83599722 (-)
G447234 NA non-coding downstream 87416 82412593 ~ 82412800 (-)
G447232 NA non-coding downstream 89120 82410806 ~ 82411096 (-)
G447226 NA non-coding downstream 102322 82397683 ~ 82397894 (-)
G447216 NA non-coding downstream 130029 82369976 ~ 82370187 (-)
G447212 NA non-coding downstream 138034 82361929 ~ 82362182 (-)
G447294 NA non-coding upstream 55759 82558317 ~ 82559201 (-)
G447310 NA non-coding upstream 75455 82578013 ~ 82584151 (-)
G447344 NA non-coding upstream 153806 82656364 ~ 82657449 (-)
G447363 NA non-coding upstream 193330 82695888 ~ 82699651 (-)
G447371 NA non-coding upstream 206556 82709114 ~ 82710270 (-)
G447220 NA other downstream 108992 82390655 ~ 82391224 (-)
G446775 NA other downstream 556605 81943285 ~ 81943611 (-)
G445220 NA other downstream 2238711 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 2274015 80223240 ~ 80233361 (-)
G445197 NA other downstream 2323136 80176762 ~ 80177080 (-)
G447993 NA other upstream 814955 83315161 ~ 83319715 (-)
G448079 NA other upstream 1007795 83510353 ~ 83520273 (-)
G448411 NA other upstream 1369044 83871602 ~ 83873308 (-)
G448452 NA other upstream 1413578 83916136 ~ 83916641 (-)
G450676 NA other upstream 2840230 85342788 ~ 85343072 (-)

Expression


Co-expression Network