G447388



Basic Information


Item Value
gene id G447388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82743511 ~ 82743859 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU506311
GTGCTTTatatactcagcaaaaaaagaaacatccaaATAACTCCACAGATCTTCatcgtaaagggtttaaacactgtttcccatgcttgttcaatgaaccataaagaattaatgaacatgcttctgtggaacggtcgttaagacactaacagcttacagatggtaggcaattaaggtcacagttatgaaaacttaggacactaaaagaggcctttctactgactctgaaaaacaccaaaagaaacatgcccagggtccctgctcatctgcgtggacgtgccttaggcatgctgcaaagaggcatgaggactgcagatgtggccagggcaatacattgcaatgtccgtac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU506311 True 349 lncRNA 0.43 1 82743511 82743859

Neighbor


gene id symbol gene type direction distance location
si:ch211-191a24.4 LOC106560402 coding downstream 137827 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 207188 82433215 ~ 82536323 (-)
igfbp3 igfbp-3a1 coding downstream 396827 82275087 ~ 82346684 (-)
LOC110524669 LOC106584070 coding downstream 853598 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 975916 81639462 ~ 81767595 (-)
LOC110524677 mafa coding upstream 223125 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 237590 82981449 ~ 83097063 (-)
adcyap1r1b adcyap1r1 coding upstream 497348 83241207 ~ 83306242 (-)
LOC110524681 LOC106560421 coding upstream 840877 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 891448 83635307 ~ 83661963 (-)
G447371 NA non-coding downstream 33241 82709114 ~ 82710270 (-)
G447363 NA non-coding downstream 43860 82695888 ~ 82699651 (-)
G447344 NA non-coding downstream 86062 82656364 ~ 82657449 (-)
G447310 NA non-coding downstream 159360 82578013 ~ 82584151 (-)
G447294 NA non-coding downstream 184310 82558317 ~ 82559201 (-)
G447418 NA non-coding upstream 27960 82771819 ~ 82775310 (-)
G447426 NA non-coding upstream 39085 82782944 ~ 82783686 (-)
G447442 NA non-coding upstream 55791 82799650 ~ 82799926 (-)
G447445 NA non-coding upstream 58327 82802186 ~ 82802401 (-)
G447448 NA non-coding upstream 59419 82803278 ~ 82803577 (-)
G447220 NA other downstream 352287 82390655 ~ 82391224 (-)
G446775 NA other downstream 799900 81943285 ~ 81943611 (-)
G445220 NA other downstream 2482006 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 2517310 80223240 ~ 80233361 (-)
G445197 NA other downstream 2566431 80176762 ~ 80177080 (-)
G447993 NA other upstream 573654 83315161 ~ 83319715 (-)
G448079 NA other upstream 766494 83510353 ~ 83520273 (-)
G448411 NA other upstream 1127743 83871602 ~ 83873308 (-)
G448452 NA other upstream 1172277 83916136 ~ 83916641 (-)
G450676 NA other upstream 2598929 85342788 ~ 85343072 (-)

Expression



Co-expression Network