G447556



Basic Information


Item Value
gene id G447556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82907431 ~ 82907825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU506484
tcaaatagtgtgagtcctggggctggagattggtccaacatgtctgctaattcattgatataaatgttgaaaagatttggactcaaattgcagccttgtctcacacctcgacattgtgaaaaaaattctgttctttggtttttgatttttattgcacacttattttctgtgtacatacattttattaagtcatacaccttaccaccaagcccactttgtagaattttgtagaatagcccttcgtgccaaatcgaatcaaatgcttttttaaagtcaataaagcaagcaaagattttgccctcttttttttggtggacgtgtttattaattagtgtgtgtaaggtgtgtatatatggtcagtagtgcgatggttagggagaaagccaatttgacat

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU506484 True 395 lncRNA 0.36 1 82907431 82907825

Neighbor


gene id symbol gene type direction distance location
si:ch211-191a24.4 LOC106560402 coding downstream 301747 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 371108 82433215 ~ 82536323 (-)
igfbp3 igfbp-3a1 coding downstream 560747 82275087 ~ 82346684 (-)
LOC110524669 LOC106584070 coding downstream 1017518 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 1139836 81639462 ~ 81767595 (-)
LOC110524677 mafa coding upstream 59159 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 73624 82981449 ~ 83097063 (-)
adcyap1r1b adcyap1r1 coding upstream 333382 83241207 ~ 83306242 (-)
LOC110524681 LOC106560421 coding upstream 676911 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 727482 83635307 ~ 83661963 (-)
G447554 NA non-coding downstream 443 82906490 ~ 82906988 (-)
G447552 NA non-coding downstream 2909 82904323 ~ 82904522 (-)
G447545 NA non-coding downstream 12309 82894159 ~ 82895122 (-)
G447536 NA non-coding downstream 16582 82890626 ~ 82890849 (-)
G447494 NA non-coding downstream 51884 82855217 ~ 82855547 (-)
G447789 NA non-coding upstream 10049 82917874 ~ 82918089 (-)
G447794 NA non-coding upstream 15001 82922826 ~ 82923028 (-)
G447797 NA non-coding upstream 19132 82926957 ~ 82927269 (-)
G447833 NA non-coding upstream 110293 83018118 ~ 83021449 (-)
G447866 NA non-coding upstream 180285 83088110 ~ 83088354 (-)
G447220 NA other downstream 516207 82390655 ~ 82391224 (-)
G446775 NA other downstream 963820 81943285 ~ 81943611 (-)
G445220 NA other downstream 2645926 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 2681230 80223240 ~ 80233361 (-)
G445197 NA other downstream 2730351 80176762 ~ 80177080 (-)
G447993 NA other upstream 409688 83315161 ~ 83319715 (-)
G448079 NA other upstream 602528 83510353 ~ 83520273 (-)
G448411 NA other upstream 963777 83871602 ~ 83873308 (-)
G448452 NA other upstream 1008311 83916136 ~ 83916641 (-)
G450676 NA other upstream 2434963 85342788 ~ 85343072 (-)

Expression



Co-expression Network