G447956



Basic Information


Item Value
gene id G447956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83229367 ~ 83232057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU506977
GTCAacacaacagacagctcagtctatGGAGCCACACAGCCAATCCAGTGAGTCAacacaacagacagctcagtctatGGAGCCACACAGCCAATCCAGAAACAGTAGAGCAgagccaccacaaagccctgaggAAGAAGAAGGAATACAAAGTGAGTTTTACAGTTATATGAACTAGCTGCATGTCAAATGTACCTTACTTTGGAACACACATTCCCCTAGGCAGTAGTGGCACACCCAAACCACGTGTGCAGGCACGCAGGCACACAGCCACACCCCTACCACGCCCCTACCACGCCCCTACCACACCCCTACCACGCCCCTACCACACCCCTACCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU506977 True 340 lncRNA 0.53 2 83229367 83232057

Neighbor


gene id symbol gene type direction distance location
LOC110524678 LOC106560415 coding downstream 132304 82981449 ~ 83097063 (-)
LOC110524677 mafa coding downstream 254778 82966984 ~ 82974589 (-)
si:ch211-191a24.4 LOC106560402 coding downstream 623683 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 693044 82433215 ~ 82536323 (-)
igfbp3 igfbp-3a1 coding downstream 882683 82275087 ~ 82346684 (-)
adcyap1r1b adcyap1r1 coding upstream 9150 83241207 ~ 83306242 (-)
LOC110524681 LOC106560421 coding upstream 352679 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 403250 83635307 ~ 83661963 (-)
LOC110523023 NA coding upstream 566759 83798816 ~ 83800505 (-)
LOC110524685 LOC106560426 coding upstream 572243 83804300 ~ 83825460 (-)
G447872 NA non-coding downstream 103433 83122074 ~ 83125934 (-)
G447883 NA non-coding downstream 109524 83119476 ~ 83119843 (-)
G447878 NA non-coding downstream 109961 83102101 ~ 83119406 (-)
G447879 NA non-coding downstream 112048 83107019 ~ 83117319 (-)
G447866 NA non-coding downstream 141013 83088110 ~ 83088354 (-)
G447959 NA non-coding upstream 736 83232793 ~ 83233048 (-)
G447960 NA non-coding upstream 2267 83234324 ~ 83235592 (-)
G447988 NA non-coding upstream 72107 83304164 ~ 83304535 (-)
G447993 NA non-coding upstream 83104 83315161 ~ 83319715 (-)
G447220 NA other downstream 838143 82390655 ~ 82391224 (-)
G446775 NA other downstream 1285756 81943285 ~ 81943611 (-)
G445220 NA other downstream 2967862 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 3003166 80223240 ~ 80233361 (-)
G445197 NA other downstream 3052287 80176762 ~ 80177080 (-)
G448079 NA other upstream 278296 83510353 ~ 83520273 (-)
G448411 NA other upstream 639545 83871602 ~ 83873308 (-)
G448452 NA other upstream 684079 83916136 ~ 83916641 (-)
G450676 NA other upstream 2110731 85342788 ~ 85343072 (-)

Expression



Co-expression Network