G448055



Basic Information


Item Value
gene id G448055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83432857 ~ 83433228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU507088
atcgctacaactcccgtacgggctcgggagagacgaagtttgaaagtcatgcgtcctccgatacacaacccaaccaagccgcactgcagccaacccggaagccaactgcaccaatgtgtcgcccggcccaccataggagtcgctggtgcgcgatgagacaaggatatccctaccggccaagccctccctaacccggacgacgctatgccaattgtgcgtcgccccacggacctcccggtcgcggccggttatgacagagcctgggagcgaacccagggtctctggtggcacagctggcgctgcagtacagcgccctttgccactgcg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU507088 True 327 lncRNA 0.63 2 83432857 83433228

Neighbor


gene id symbol gene type direction distance location
adcyap1r1b adcyap1r1 coding downstream 126615 83241207 ~ 83306242 (-)
LOC110524678 LOC106560415 coding downstream 335794 82981449 ~ 83097063 (-)
LOC110524677 mafa coding downstream 458268 82966984 ~ 82974589 (-)
si:ch211-191a24.4 LOC106560402 coding downstream 827173 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 896534 82433215 ~ 82536323 (-)
LOC110524681 LOC106560421 coding upstream 151508 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 202079 83635307 ~ 83661963 (-)
LOC110523023 NA coding upstream 365588 83798816 ~ 83800505 (-)
LOC110524685 LOC106560426 coding upstream 371072 83804300 ~ 83825460 (-)
LOC110522893 LOC106560472 coding upstream 447253 83879999 ~ 83896988 (-)
G448012 NA non-coding downstream 30329 83387463 ~ 83402528 (-)
G448003 NA non-coding downstream 100056 83332165 ~ 83332801 (-)
G447993 NA non-coding downstream 114009 83315161 ~ 83319715 (-)
G447988 NA non-coding downstream 128322 83304164 ~ 83304535 (-)
G448062 NA non-coding upstream 30138 83463366 ~ 83463611 (-)
G448071 NA non-coding upstream 32973 83466201 ~ 83517728 (-)
G448074 NA non-coding upstream 33380 83466608 ~ 83517358 (-)
G448072 NA non-coding upstream 33894 83467122 ~ 83508892 (-)
G448075 NA non-coding upstream 68037 83501265 ~ 83518023 (-)
G447220 NA other downstream 1041633 82390655 ~ 82391224 (-)
G446775 NA other downstream 1489246 81943285 ~ 81943611 (-)
G445220 NA other downstream 3171352 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 3206656 80223240 ~ 80233361 (-)
G448079 NA other upstream 77125 83510353 ~ 83520273 (-)
G448411 NA other upstream 438374 83871602 ~ 83873308 (-)
G448452 NA other upstream 482908 83916136 ~ 83916641 (-)
G450676 NA other upstream 1909560 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 2012453 85443496 ~ 85472422 (-)

Expression



Co-expression Network