G448079


Basic Information

Item Value
gene id G448079
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83510353 ~ 83520273 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU507137
agtgatgtgtctcccacatcagtgatgtgtctcccacatcagtggtgtgtctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtatctcccacatcagtggtgtgtctcccacatcagtgttgtatctcccacatcagtggtgtgtctcccacatcagtgttgtatctcccacatcagtgttgtatctcccacatcagtgatgtgtctcccacatcagtggtgtgtctaccacatcagtgatgtgtctcccacatcagtgttgtatctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtatctcccacatcagtggtgtgtctcccacatcagtgttgtatctcccacatcagtgatgtgtctcccacatcagtgtgttatctcccacatcagtgttgtgtctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtatctcccacatcagtggtgtgtctcccacatcagtgatgtgtctcccacatcagtgtgttatctcccacatcagtgttgtgtctcccacatcagtattgtgtctcccacatcagtgttgtatctcccacatcagtgttgtgtctcccacatcagtgttgtatctcccacatcagtgttgtgtctcccacatcagtgttgtgtctcccacatcagtgttgtgtctcccacatca

Function

NR:

description
Scavenger receptor cysteine-rich type 1 protein M130

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU507137 True 821 TUCP 0.48 2 83510353 83520273

Neighbor

gene id symbol gene type direction distance location
adcyap1r1b adcyap1r1 coding downstream 204111 83241207 ~ 83306242 (-)
LOC110524678 LOC106560415 coding downstream 413290 82981449 ~ 83097063 (-)
LOC110524677 mafa coding downstream 535764 82966984 ~ 82974589 (-)
si:ch211-191a24.4 LOC106560402 coding downstream 904669 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 974030 82433215 ~ 82536323 (-)
LOC110524681 LOC106560421 coding upstream 64463 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 115034 83635307 ~ 83661963 (-)
LOC110523023 NA coding upstream 278543 83798816 ~ 83800505 (-)
LOC110524685 LOC106560426 coding upstream 284027 83804300 ~ 83825460 (-)
LOC110522893 LOC106560472 coding upstream 360208 83879999 ~ 83896988 (-)
G448072 NA non-coding downstream 1461 83467122 ~ 83508892 (-)
G448062 NA non-coding downstream 46742 83463366 ~ 83463611 (-)
G448055 NA non-coding downstream 77125 83432857 ~ 83433228 (-)
G448012 NA non-coding downstream 107825 83387463 ~ 83402528 (-)
G448003 NA non-coding downstream 177552 83332165 ~ 83332801 (-)
G448086 NA non-coding upstream 15443 83535716 ~ 83536317 (-)
G448163 NA non-coding upstream 32825 83553098 ~ 83553338 (-)
G448176 NA non-coding upstream 48000 83568273 ~ 83569049 (-)
G448210 NA non-coding upstream 122086 83642359 ~ 83648780 (-)
G448242 NA non-coding upstream 166659 83686932 ~ 83687169 (-)
G447993 NA other downstream 190638 83315161 ~ 83319715 (-)
G447220 NA other downstream 1119129 82390655 ~ 82391224 (-)
G446775 NA other downstream 1566742 81943285 ~ 81943611 (-)
G445220 NA other downstream 3248848 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 3284152 80223240 ~ 80233361 (-)
G448411 NA other upstream 351329 83871602 ~ 83873308 (-)
G448452 NA other upstream 395863 83916136 ~ 83916641 (-)
G450676 NA other upstream 1822515 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1925408 85443496 ~ 85472422 (-)
G450752 NA other upstream 1966569 85486842 ~ 85487158 (-)

Expression


Co-expression Network