G448086


Basic Information

Item Value
gene id G448086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83535716 ~ 83536317 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU507144
catcagtgttgtgtctcccacatcagtgttgtatctaccacatcagtgttgtatctcccacatcagtgttgtatctcccacatcagtattgtgtctcccacatcagtgttgtatctaccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtattgtatctcccacatcagtgttgtatctaccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtattgtatctaccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtattgtatctaccacatcagtattgtatctaccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtattgtatctaccacatcagtattgtgtctaccacatcagtggtgtgtctcccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtattgtgtctaccacatcagtgttgtatctaccacatcagtgttgtatctaccacatcagtgttgtgtctaccacatcagtattgtgtctaccacatcagtgttgtatctaccaca

Function

NR:

description
proline-rich 33 kDa extensin-related protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU507144 True 602 lncRNA 0.41 1 83535716 83536317

Neighbor

gene id symbol gene type direction distance location
adcyap1r1b adcyap1r1 coding downstream 229474 83241207 ~ 83306242 (-)
LOC110524678 LOC106560415 coding downstream 438653 82981449 ~ 83097063 (-)
LOC110524677 mafa coding downstream 561127 82966984 ~ 82974589 (-)
si:ch211-191a24.4 LOC106560402 coding downstream 930032 82601460 ~ 82605684 (-)
si:ch211-191a24.3 LOC106560396 coding downstream 999393 82433215 ~ 82536323 (-)
LOC110524681 LOC106560421 coding upstream 48419 83584736 ~ 83599722 (-)
LOC110524682 LOC106560471 coding upstream 98990 83635307 ~ 83661963 (-)
LOC110523023 NA coding upstream 262499 83798816 ~ 83800505 (-)
LOC110524685 LOC106560426 coding upstream 267983 83804300 ~ 83825460 (-)
LOC110522893 LOC106560472 coding upstream 344164 83879999 ~ 83896988 (-)
G448075 NA non-coding downstream 17693 83501265 ~ 83518023 (-)
G448071 NA non-coding downstream 17988 83466201 ~ 83517728 (-)
G448074 NA non-coding downstream 18358 83466608 ~ 83517358 (-)
G448072 NA non-coding downstream 26824 83467122 ~ 83508892 (-)
G448062 NA non-coding downstream 72105 83463366 ~ 83463611 (-)
G448163 NA non-coding upstream 16781 83553098 ~ 83553338 (-)
G448176 NA non-coding upstream 31956 83568273 ~ 83569049 (-)
G448210 NA non-coding upstream 106042 83642359 ~ 83648780 (-)
G448242 NA non-coding upstream 150615 83686932 ~ 83687169 (-)
G448252 NA non-coding upstream 161733 83698050 ~ 83698306 (-)
G448079 NA other downstream 15443 83510353 ~ 83520273 (-)
G447993 NA other downstream 216001 83315161 ~ 83319715 (-)
G447220 NA other downstream 1144492 82390655 ~ 82391224 (-)
G446775 NA other downstream 1592105 81943285 ~ 81943611 (-)
G445220 NA other downstream 3274211 80245943 ~ 80261505 (-)
G448411 NA other upstream 335285 83871602 ~ 83873308 (-)
G448452 NA other upstream 379819 83916136 ~ 83916641 (-)
G450676 NA other upstream 1806471 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1909364 85443496 ~ 85472422 (-)
G450752 NA other upstream 1950525 85486842 ~ 85487158 (-)

Expression


Co-expression Network