G448384



Basic Information


Item Value
gene id G448384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83858695 ~ 83859127 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU507495
CCTAAGACCTGTTCAGTATTCTACAATCTCCTAAGACCTGTTCAGTATTCTACAATCTGTAACggccgtcgtcggtggaagaaggtgaggaccaaggtgcagcgtggtaagtgtaacatgatttttaatataatcaaaactgaacactaaacaaaacaacaactagGAAGaatgaacaaacaaaacagtcctgtgtagtgatgacacacaaaacagaaaataatcacccaccaaacactggtgggaaaaggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgattgagaaccataccaggccaaactcaaaatacaacatagaaaaacaaacataggctgcccaccccaactcacgccctgaccatactaaaacaaatacaaaacaaaggaactaaggtcagaacgtgacacaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU507495 True 433 lncRNA 0.41 1 83858695 83859127

Neighbor


gene id symbol gene type direction distance location
LOC110524685 LOC106560426 coding downstream 33235 83804300 ~ 83825460 (-)
LOC110523023 NA coding downstream 58190 83798816 ~ 83800505 (-)
LOC110524682 LOC106560471 coding downstream 196732 83635307 ~ 83661963 (-)
LOC110524681 LOC106560421 coding downstream 258973 83584736 ~ 83599722 (-)
adcyap1r1b adcyap1r1 coding downstream 552453 83241207 ~ 83306242 (-)
LOC110522893 LOC106560472 coding upstream 21354 83879999 ~ 83896988 (-)
podn LOC106560429 coding upstream 207047 84066174 ~ 84120343 (-)
LOC118964673 NA coding upstream 229865 84088992 ~ 84090407 (-)
LOC118964672 NA coding upstream 231419 84090546 ~ 84091472 (-)
scp2b LOC106560430 coding upstream 262222 84121349 ~ 84138828 (-)
G448378 NA non-coding downstream 3145 83849702 ~ 83855550 (-)
G448302 NA non-coding downstream 81476 83777006 ~ 83777219 (-)
G448296 NA non-coding downstream 85976 83771947 ~ 83772719 (-)
G448289 NA non-coding downstream 89225 83761781 ~ 83769470 (-)
G448272 NA non-coding downstream 130712 83727472 ~ 83727983 (-)
G448387 NA non-coding upstream 2025 83861152 ~ 83861477 (-)
G448413 NA non-coding upstream 11862 83870989 ~ 83871381 (-)
G448418 NA non-coding upstream 27585 83886712 ~ 83886971 (-)
G448420 NA non-coding upstream 30662 83889789 ~ 83890023 (-)
G448079 NA other downstream 338422 83510353 ~ 83520273 (-)
G447993 NA other downstream 538980 83315161 ~ 83319715 (-)
G447220 NA other downstream 1467471 82390655 ~ 82391224 (-)
G446775 NA other downstream 1915084 81943285 ~ 81943611 (-)
G445220 NA other downstream 3597190 80245943 ~ 80261505 (-)
G448411 NA other upstream 12475 83871602 ~ 83873308 (-)
G448452 NA other upstream 57009 83916136 ~ 83916641 (-)
G450676 NA other upstream 1483661 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1586554 85443496 ~ 85472422 (-)
G450752 NA other upstream 1627715 85486842 ~ 85487158 (-)

Expression



Co-expression Network