G448413



Basic Information


Item Value
gene id G448413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83870989 ~ 83871381 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU507524
tttgtatttatttagtatggtcagggcgtgagttgggtgggcagtctatgtttgtttttctatgttttggggcatttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggttgcactgtttgtttgtgggtgattgtctatgttgatggcttgtttcagcacaggtctcatttttgtagcttcacggttgaatttggtttattgtttttgttactcgtttgtatagtgttcagtctttctttattaaagattttaccatggacacttaccacgccgcatattggtcctctgatccttctcgcctctcctcttcagacgaagaggaggacggccgtgacaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU507524 True 393 lncRNA 0.42 1 83870989 83871381

Neighbor


gene id symbol gene type direction distance location
LOC110524685 LOC106560426 coding downstream 45529 83804300 ~ 83825460 (-)
LOC110523023 NA coding downstream 70484 83798816 ~ 83800505 (-)
LOC110524682 LOC106560471 coding downstream 209026 83635307 ~ 83661963 (-)
LOC110524681 LOC106560421 coding downstream 271267 83584736 ~ 83599722 (-)
adcyap1r1b adcyap1r1 coding downstream 564747 83241207 ~ 83306242 (-)
LOC110522893 LOC106560472 coding upstream 9100 83879999 ~ 83896988 (-)
podn LOC106560429 coding upstream 194793 84066174 ~ 84120343 (-)
LOC118964673 NA coding upstream 217611 84088992 ~ 84090407 (-)
LOC118964672 NA coding upstream 219165 84090546 ~ 84091472 (-)
scp2b LOC106560430 coding upstream 249968 84121349 ~ 84138828 (-)
G448387 NA non-coding downstream 9512 83861152 ~ 83861477 (-)
G448384 NA non-coding downstream 11862 83858695 ~ 83859127 (-)
G448378 NA non-coding downstream 15439 83849702 ~ 83855550 (-)
G448302 NA non-coding downstream 93770 83777006 ~ 83777219 (-)
G448296 NA non-coding downstream 98270 83771947 ~ 83772719 (-)
G448418 NA non-coding upstream 15331 83886712 ~ 83886971 (-)
G448420 NA non-coding upstream 18408 83889789 ~ 83890023 (-)
G448422 NA non-coding upstream 19740 83891121 ~ 83891358 (-)
G448445 NA non-coding upstream 36402 83907783 ~ 83908071 (-)
G448079 NA other downstream 350716 83510353 ~ 83520273 (-)
G447993 NA other downstream 551274 83315161 ~ 83319715 (-)
G447220 NA other downstream 1479765 82390655 ~ 82391224 (-)
G446775 NA other downstream 1927378 81943285 ~ 81943611 (-)
G445220 NA other downstream 3609484 80245943 ~ 80261505 (-)
G448411 NA other upstream 221 83871602 ~ 83873308 (-)
G448452 NA other upstream 44755 83916136 ~ 83916641 (-)
G450676 NA other upstream 1471407 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1574300 85443496 ~ 85472422 (-)
G450752 NA other upstream 1615461 85486842 ~ 85487158 (-)

Expression



Co-expression Network