G448411



Basic Information


Item Value
gene id G448411
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 83871602 ~ 83873308 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU507522
cctgtgtatattggtttctaacttccctgaaaagttgcatatcacgggggctgttcgatgctaatgcagaacgccataggatgtttttgtgaaccaagggctatatctgttcctggttctccattttttgaatgggccatgcttatttaagatggtgaggaaggcatttaaaataaaaaaacaggcatcctctactgacaggatgaggtcaatatccttccaacatacccgggccaggtcgattagaagttttgtcgcaccttgactactgttcagtcgtgtggtcaggtaccACAAAAAATTGTAATTTGctcagaacagagcggcacagagagctaatattaataatctgcatgtcaatctctcatggatCAAGGTGGAGGAgatattgacttcatcactacttgtatttatgagaggtattgacatgttgaatataCCAAGCTGTctatctaaactactggcacacagctcggacacccatgcataccccacaagacatgccacaagaggtctcttcacagtccccaagtccagaacagactatgggaggtgcacagtactacatagaaccatgacgacatggaactctattccacatcaagtaactaatGCCAGCAGTAATAGAAGAttgaaaaaacagataaaaaaaacatattatgGAACACAttgtggaacagcggggactgtgacgCAACACtcacataggcacagacacatgcatacacacaaacacacacacacattgatttagtactgtagatatgtggtggtggtggtggagtaggggcctgaggacacacagtgtgttgtgaaatctgtgaatgtatagtaatgtttttttaattatgtaaactgccttcattttgcacgaccccgggaagagtagctgctgccttggcaggaactaatggagaaccataataaacccctggaagagtagctgctgccttggaaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccaaaataaatacaaatgcaaaAGAGTTATGTTGCTCGTCCTAATTTAGGCCTACTTTGCTCCAGTATGCAGAAGTATTTCATTGCTGGGCAAAAATAAGGAATTAGTGGTATCATGTGCCCAAGCTGTTTTACAGACAATGATGAGCCTCTAGCTGCAGTCGCTTTTTTGCAAAGGAGGTGTTGGTTGTTCTGTTTGGTATGTGAAATGTTTGTCAACAAAATGTGTTTGTCTCAATCTTTGACTGATTTAAACAATGTGTGCTACTGTGAGGtgccaaataaaatgtttttgtattgtttttgttttatcaggCATATAATGATAGCCGGTTGTGTATCATGCACACAAAAACCTGTAGGGTTTATATTCAGAGAACAGAAATGTCTGAATCAGCTGTCGATTGACTTTGTACATAATGGTTGTCAATAATGTCGCTGTTTACAAATGACAGATGTGTGCTTTTGTCTGGTGAGGCATTGAGAATCCTGATGTAATGTTGTGGTTTGATTAAATACAACAGGATTGCTTCATGTTATGGGCAGCTTCAGTAAAACTCAATGTTTCATCTACCACCATAATGAATTCAATATTTTCCAAATAGTGAAAATGACAGCACTGTGTAAGGATGCACCTTTTAACTCTGCCAGATGCACTGTTTACTTATTGATGGTAGTAGGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU507522 True 1707 TUCP 0.41 1 83871602 83873308

Neighbor


gene id symbol gene type direction distance location
LOC110524685 LOC106560426 coding downstream 46142 83804300 ~ 83825460 (-)
LOC110523023 NA coding downstream 71097 83798816 ~ 83800505 (-)
LOC110524682 LOC106560471 coding downstream 209639 83635307 ~ 83661963 (-)
LOC110524681 LOC106560421 coding downstream 271880 83584736 ~ 83599722 (-)
adcyap1r1b adcyap1r1 coding downstream 565360 83241207 ~ 83306242 (-)
LOC110522893 LOC106560472 coding upstream 7173 83879999 ~ 83896988 (-)
podn LOC106560429 coding upstream 192866 84066174 ~ 84120343 (-)
LOC118964673 NA coding upstream 215684 84088992 ~ 84090407 (-)
LOC118964672 NA coding upstream 217238 84090546 ~ 84091472 (-)
scp2b LOC106560430 coding upstream 248041 84121349 ~ 84138828 (-)
G448413 NA non-coding downstream 221 83870989 ~ 83871381 (-)
G448387 NA non-coding downstream 10125 83861152 ~ 83861477 (-)
G448384 NA non-coding downstream 12475 83858695 ~ 83859127 (-)
G448378 NA non-coding downstream 16052 83849702 ~ 83855550 (-)
G448302 NA non-coding downstream 94383 83777006 ~ 83777219 (-)
G448418 NA non-coding upstream 13404 83886712 ~ 83886971 (-)
G448420 NA non-coding upstream 16481 83889789 ~ 83890023 (-)
G448422 NA non-coding upstream 17813 83891121 ~ 83891358 (-)
G448445 NA non-coding upstream 34475 83907783 ~ 83908071 (-)
G448079 NA other downstream 351329 83510353 ~ 83520273 (-)
G447993 NA other downstream 551887 83315161 ~ 83319715 (-)
G447220 NA other downstream 1480378 82390655 ~ 82391224 (-)
G446775 NA other downstream 1927991 81943285 ~ 81943611 (-)
G445220 NA other downstream 3610097 80245943 ~ 80261505 (-)
G448452 NA other upstream 42828 83916136 ~ 83916641 (-)
G450676 NA other upstream 1469480 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1572373 85443496 ~ 85472422 (-)
G450752 NA other upstream 1613534 85486842 ~ 85487158 (-)
G450957 NA other upstream 2004425 85877733 ~ 85878974 (-)

Expression



Co-expression Network