G449185



Basic Information


Item Value
gene id G449185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 84210809 ~ 84211925 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU508374
tatacagtgtgtgcaaatggcgtgaggtggtaaaggcaataaataatagtagtgaagtaattacagtttagcaaattaacactggagtgataaatagcagatgatgatgtgcaagcagAAATACTGGtgatatggggatgaggtaggtagattgggtgggctatgtacagctgcagtgatcggttagttgctcagatagctgatgtttaaagttagtgagggaaatgtaagtctccagcttcagcgatttttgcaattcgttccagtcattggcagcagagaactggaagaaaggcagccaaaagaggtgttggctttggggatgaccagtgagatatacctgctggagcgtgtgctacgggtgggtgttgttatcgtgaccagtgagctgagataaggcggagctttacctagcatagacttatagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccaactagagcatacaggtcacagtggtgggtggtataaggggcattggtgacaaaacggatggcactgtgagacagactgcatccagtttgctgagtattggaagctattggCCAGggcaatgaagacggctgcacagtactgtcttttatcgatggcggttatgatatcgtttagtaccttgagtgtggctgaggtgcacccgtgaccagctcgaaaaccagattgcacagcggagaaggtacagtgggattcgaaatggtcagtgatctgttccttgccttggctttcgaagactttcgaaaggcagggcaggatggatataggtctataacagtttgggacGAGTGTCACcacttttgaagagggggatgaccgcggcagatttaaaatctttagggatctcggacgatacgaaagaggttgaacagactggtaataggggttgcaacaatggcggcggatcattttagaaagagggtccagattgtctagccttgctgatttgtacaggtccaggttttgcagctctttcagaacacctgctatctggatttgggtgaatgagaagctggggaggcttgggcaagtagcggCGGGGGatggggagct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU508374 True 1087 lncRNA 0.48 2 84210809 84211925

Neighbor


gene id symbol gene type direction distance location
LOC110524694 LOC106560433 coding downstream 37156 84158137 ~ 84173653 (-)
magoh LOC106560432 coding downstream 53445 84151778 ~ 84157364 (-)
scp2b LOC106560430 coding downstream 71981 84121349 ~ 84138828 (-)
LOC118964672 NA coding downstream 119337 84090546 ~ 84091472 (-)
LOC118964673 NA coding downstream 120402 84088992 ~ 84090407 (-)
LOC110524696 NA coding upstream 23760 84235685 ~ 84238143 (-)
trnar-acg-4 NA coding upstream 98005 84309930 ~ 84310002 (-)
LOC110522894 NA coding upstream 112055 84323980 ~ 84326565 (-)
LOC110524701 LOC106560440 coding upstream 114906 84326831 ~ 84349222 (-)
slc25a24 slc25a24 coding upstream 139011 84350936 ~ 84362693 (-)
G449168 NA non-coding downstream 2546 84179877 ~ 84208263 (-)
G449178 NA non-coding downstream 3652 84206284 ~ 84207157 (-)
G449145 NA non-coding downstream 69709 84135924 ~ 84141100 (-)
G449141 NA non-coding downstream 81929 84128552 ~ 84128880 (-)
G449074 NA non-coding downstream 119933 84089855 ~ 84090876 (-)
G449177 aldh9a1 non-coding upstream 6028 84217953 ~ 84219181 (-)
G449182 NA non-coding upstream 18721 84230646 ~ 84232680 (-)
G449180 NA non-coding upstream 22094 84234019 ~ 84253939 (-)
G449172 NA non-coding upstream 23138 84235063 ~ 84255123 (-)
G449224 NA non-coding upstream 56760 84268685 ~ 84268906 (-)
G448452 NA other downstream 294168 83916136 ~ 83916641 (-)
G448411 NA other downstream 337501 83871602 ~ 83873308 (-)
G448079 NA other downstream 690536 83510353 ~ 83520273 (-)
G447993 NA other downstream 891094 83315161 ~ 83319715 (-)
G447220 NA other downstream 1819585 82390655 ~ 82391224 (-)
G450676 NA other upstream 1130863 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 1233756 85443496 ~ 85472422 (-)
G450752 NA other upstream 1274917 85486842 ~ 85487158 (-)
G450957 NA other upstream 1665808 85877733 ~ 85878974 (-)
G451271 NA other upstream 2336913 86548838 ~ 86549878 (-)

Expression



Co-expression Network