G449331



Basic Information


Item Value
gene id G449331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 84466681 ~ 84467370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU508541
aaataatcacagaaatgcataaacaaacaaacaaacagtaggtatggttacaaggaaatgataggggatgttccctagtgggctaagccgatatggcgacttggtagacaaagggaagtgggtgtggactgagaagggtGCGAAAGACAAAagtcactacacagttgataattatattgattgaaatgctaatcctttgcacatgaacgcttactcattcgggaataattgcaattaATATAtctttacgctcagtgtgtcgtcgtgatctctgttggaatcgtccgTCTTTCTGTTGGAAAGTTAATCTGATCGTCTCTGCTCCCATGAAGTCTCTCGTGGTttgaatggatacttcagagtcccATTCAGAAATGTTGTTATAGAACAgctgtttcggcggttgtcggtcttcgcattTGAGTTTGAGgttttctagctgcagactagtaattagtatcgaagatttgctcttattctgttggaatcgatagtctcagagtttcaacaaccattacaaccttagcTTATACTGAGGTTTttatggtctctactcaaacctttgCCCCCTCTGTGATCAAGGTTGGCCTGAAGGGAATTCCTTCAGGTGGGGGTTATATTCGTAACagtagaaaagggctgtcccatgacgccagatcaatgtctgtgctcatggggcgggccaatgac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU508541 True 690 lncRNA 0.43 1 84466681 84467370

Neighbor


gene id symbol gene type direction distance location
LOC110523024 fndc7 coding downstream 47359 84393650 ~ 84419322 (-)
henmt1 henmt1 coding downstream 73654 84389475 ~ 84393027 (-)
slc25a24 slc25a24 coding downstream 103988 84350936 ~ 84362693 (-)
LOC110524701 LOC106560440 coding downstream 117459 84326831 ~ 84349222 (-)
LOC110522894 NA coding downstream 140116 84323980 ~ 84326565 (-)
mcoln3b LOC106560446 coding upstream 53397 84520767 ~ 84531311 (-)
syde2 syde2 coding upstream 118651 84586021 ~ 84670458 (-)
LOC110524711 cssa10h1orf52 coding upstream 226225 84693595 ~ 84697943 (-)
ddah1 ddah1 coding upstream 242562 84709932 ~ 84862159 (-)
znhit6 znhit6 coding upstream 412633 84880003 ~ 84933122 (-)
G449261 NA non-coding downstream 142979 84323495 ~ 84323702 (-)
G449258 NA non-coding downstream 146154 84320313 ~ 84320527 (-)
G449243 NA non-coding downstream 172393 84293988 ~ 84294288 (-)
G449238 NA non-coding downstream 177913 84288550 ~ 84288768 (-)
G449334 NA non-coding upstream 4726 84472096 ~ 84472405 (-)
G449335 NA non-coding upstream 5082 84472452 ~ 84472658 (-)
G449336 NA non-coding upstream 6207 84473577 ~ 84473837 (-)
G449341 NA non-coding upstream 25251 84492621 ~ 84492878 (-)
G449344 NA non-coding upstream 28616 84495986 ~ 84496462 (-)
G448452 NA other downstream 550040 83916136 ~ 83916641 (-)
G448411 NA other downstream 593373 83871602 ~ 83873308 (-)
G448079 NA other downstream 946408 83510353 ~ 83520273 (-)
G447993 NA other downstream 1146966 83315161 ~ 83319715 (-)
G447220 NA other downstream 2075457 82390655 ~ 82391224 (-)
G450676 NA other upstream 875418 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 978311 85443496 ~ 85472422 (-)
G450752 NA other upstream 1019472 85486842 ~ 85487158 (-)
G450957 NA other upstream 1410363 85877733 ~ 85878974 (-)
G451271 NA other upstream 2081468 86548838 ~ 86549878 (-)

Expression



Co-expression Network