G449341



Basic Information


Item Value
gene id G449341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 84492621 ~ 84492878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU508552
GTATCAGGGTTTTCTTTTTAAAGCCATTTATACAGGTAATTCTGATATGTACCCTAGAAGTCAAAGTTCTGTTTACCTGAACATTCTGAAAATGTGTCTGATGGATAGCTTTGAATGTAAGTTTTCCAATGACACCTGATTAAAGGGTATAATTGAGCAATATCTTGTATACTGACATTGTTTGACATAGGGCAAAATGTATGGGATGGGGGGATGAAAGAAAGAGTGATAACACAGAGAAAGTTATCATTTCTGCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU508552 True 258 lncRNA 0.35 1 84492621 84492878

Neighbor


gene id symbol gene type direction distance location
LOC110523024 fndc7 coding downstream 73299 84393650 ~ 84419322 (-)
henmt1 henmt1 coding downstream 99594 84389475 ~ 84393027 (-)
slc25a24 slc25a24 coding downstream 129928 84350936 ~ 84362693 (-)
LOC110524701 LOC106560440 coding downstream 143399 84326831 ~ 84349222 (-)
LOC110522894 NA coding downstream 166056 84323980 ~ 84326565 (-)
mcoln3b LOC106560446 coding upstream 27889 84520767 ~ 84531311 (-)
syde2 syde2 coding upstream 93143 84586021 ~ 84670458 (-)
LOC110524711 cssa10h1orf52 coding upstream 200717 84693595 ~ 84697943 (-)
ddah1 ddah1 coding upstream 217054 84709932 ~ 84862159 (-)
znhit6 znhit6 coding upstream 387125 84880003 ~ 84933122 (-)
G449336 NA non-coding downstream 18784 84473577 ~ 84473837 (-)
G449335 NA non-coding downstream 19963 84472452 ~ 84472658 (-)
G449334 NA non-coding downstream 20216 84472096 ~ 84472405 (-)
G449331 NA non-coding downstream 25251 84466681 ~ 84467370 (-)
G449344 NA non-coding upstream 3108 84495986 ~ 84496462 (-)
G449352 NA non-coding upstream 11774 84504652 ~ 84507176 (-)
G449358 NA non-coding upstream 18025 84510903 ~ 84511215 (-)
G449378 NA non-coding upstream 58255 84551133 ~ 84554495 (-)
G449380 NA non-coding upstream 67857 84560735 ~ 84561053 (-)
G448452 NA other downstream 575980 83916136 ~ 83916641 (-)
G448411 NA other downstream 619313 83871602 ~ 83873308 (-)
G448079 NA other downstream 972348 83510353 ~ 83520273 (-)
G447993 NA other downstream 1172906 83315161 ~ 83319715 (-)
G447220 NA other downstream 2101397 82390655 ~ 82391224 (-)
G450676 NA other upstream 849910 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 952803 85443496 ~ 85472422 (-)
G450752 NA other upstream 993964 85486842 ~ 85487158 (-)
G450957 NA other upstream 1384855 85877733 ~ 85878974 (-)
G451271 NA other upstream 2055960 86548838 ~ 86549878 (-)

Expression



Co-expression Network