G449344



Basic Information


Item Value
gene id G449344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 84495986 ~ 84496462 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU508555
cccttaAATGATACTCCAGGGACCTTTTCTTTTTAGAgtgtacggtgaagcatggtggtggccgcgtcatgctgtgggcatgcttttcagcgacagggactaggagactcgtcaggatcaaggcaaagatgaatgaagcaaagtacagagatccttgaagaaaacctgctccagagagctcaggacctcagactggggcaaaggttcaccttccaataagacaacgaacctaagcacacagccaagacaatgcaggagtggctttgggacaagtctctgaatgtccttgagtggcccagccagagcccggacttgaacccgatcgaacatctctggagagacctgaaaatagctgtgcagcaacactccccatccaacctgacagtgcttgatgggatctgcagagaacaatgggagtaaatccccaaatacaggtgtgccaaacttgtagcgtcatactcaagaagactcaaggct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU508555 True 477 lncRNA 0.50 1 84495986 84496462

Neighbor


gene id symbol gene type direction distance location
LOC110523024 fndc7 coding downstream 76664 84393650 ~ 84419322 (-)
henmt1 henmt1 coding downstream 102959 84389475 ~ 84393027 (-)
slc25a24 slc25a24 coding downstream 133293 84350936 ~ 84362693 (-)
LOC110524701 LOC106560440 coding downstream 146764 84326831 ~ 84349222 (-)
LOC110522894 NA coding downstream 169421 84323980 ~ 84326565 (-)
mcoln3b LOC106560446 coding upstream 24305 84520767 ~ 84531311 (-)
syde2 syde2 coding upstream 89559 84586021 ~ 84670458 (-)
LOC110524711 cssa10h1orf52 coding upstream 197133 84693595 ~ 84697943 (-)
ddah1 ddah1 coding upstream 213470 84709932 ~ 84862159 (-)
znhit6 znhit6 coding upstream 383541 84880003 ~ 84933122 (-)
G449341 NA non-coding downstream 3108 84492621 ~ 84492878 (-)
G449336 NA non-coding downstream 22149 84473577 ~ 84473837 (-)
G449335 NA non-coding downstream 23328 84472452 ~ 84472658 (-)
G449334 NA non-coding downstream 23581 84472096 ~ 84472405 (-)
G449331 NA non-coding downstream 28616 84466681 ~ 84467370 (-)
G449352 NA non-coding upstream 8190 84504652 ~ 84507176 (-)
G449358 NA non-coding upstream 14441 84510903 ~ 84511215 (-)
G449378 NA non-coding upstream 54671 84551133 ~ 84554495 (-)
G449380 NA non-coding upstream 64273 84560735 ~ 84561053 (-)
G449388 NA non-coding upstream 79509 84575971 ~ 84576211 (-)
G448452 NA other downstream 579345 83916136 ~ 83916641 (-)
G448411 NA other downstream 622678 83871602 ~ 83873308 (-)
G448079 NA other downstream 975713 83510353 ~ 83520273 (-)
G447993 NA other downstream 1176271 83315161 ~ 83319715 (-)
G447220 NA other downstream 2104762 82390655 ~ 82391224 (-)
G450676 NA other upstream 846326 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 949219 85443496 ~ 85472422 (-)
G450752 NA other upstream 990380 85486842 ~ 85487158 (-)
G450957 NA other upstream 1381271 85877733 ~ 85878974 (-)
G451271 NA other upstream 2052376 86548838 ~ 86549878 (-)

Expression



Co-expression Network