G449380



Basic Information


Item Value
gene id G449380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 84560735 ~ 84561053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU508594
TTTGTAGTACTGTGTTAAATGAGTTGTGTGAAAGGCCTCTGGTTTCAGGGAGCATCAGACATCAGCCTGAACACTGgacaccagggttggtCACACGAGGTGTGATATCAGGTGTCAGACTGAACagtggattagggttaggatgtCAGATGTCAACCTTGTCTGTGTCTGGCAGCAGCCCCATTTCCTTCAGGATGACCGTCTCCAAGGACAAGTAGTCCTCATACTCCTTCATGGCCTCCTCCAAGATCTGCTCCACCTGCTTCTCT

Function


NR:

description
WD repeat-containing protein 63 isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU508594 True 269 lncRNA 0.50 2 84560735 84561053

Neighbor


gene id symbol gene type direction distance location
mcoln3b LOC106560446 coding downstream 29424 84520767 ~ 84531311 (-)
LOC110523024 fndc7 coding downstream 141413 84393650 ~ 84419322 (-)
henmt1 henmt1 coding downstream 167708 84389475 ~ 84393027 (-)
slc25a24 slc25a24 coding downstream 198042 84350936 ~ 84362693 (-)
LOC110524701 LOC106560440 coding downstream 211513 84326831 ~ 84349222 (-)
syde2 syde2 coding upstream 24968 84586021 ~ 84670458 (-)
LOC110524711 cssa10h1orf52 coding upstream 132542 84693595 ~ 84697943 (-)
ddah1 ddah1 coding upstream 148879 84709932 ~ 84862159 (-)
znhit6 znhit6 coding upstream 318950 84880003 ~ 84933122 (-)
LOC110524715 col24a1 coding upstream 372953 84934006 ~ 85175437 (-)
G449378 NA non-coding downstream 6240 84551133 ~ 84554495 (-)
G449358 NA non-coding downstream 49520 84510903 ~ 84511215 (-)
G449352 NA non-coding downstream 53559 84504652 ~ 84507176 (-)
G449344 NA non-coding downstream 64273 84495986 ~ 84496462 (-)
G449341 NA non-coding downstream 67857 84492621 ~ 84492878 (-)
G449388 NA non-coding upstream 14918 84575971 ~ 84576211 (-)
G449394 NA non-coding upstream 16411 84577464 ~ 84577696 (-)
G449396 NA non-coding upstream 19905 84580958 ~ 84581711 (-)
G449400 NA non-coding upstream 33241 84594294 ~ 84594539 (-)
G449401 NA non-coding upstream 33494 84594547 ~ 84594784 (-)
G448452 NA other downstream 644094 83916136 ~ 83916641 (-)
G448411 NA other downstream 687427 83871602 ~ 83873308 (-)
G448079 NA other downstream 1040462 83510353 ~ 83520273 (-)
G447993 NA other downstream 1241020 83315161 ~ 83319715 (-)
G447220 NA other downstream 2169511 82390655 ~ 82391224 (-)
G450676 NA other upstream 781735 85342788 ~ 85343072 (-)
lurap1 LOC106560455 other upstream 884628 85443496 ~ 85472422 (-)
G450752 NA other upstream 925789 85486842 ~ 85487158 (-)
G450957 NA other upstream 1316680 85877733 ~ 85878974 (-)
G451271 NA other upstream 1987785 86548838 ~ 86549878 (-)

Expression



Co-expression Network