G450767


Basic Information

Item Value
gene id G450767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 85525811 ~ 85527502 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510198
gccgaatacaacagaaacacattgaaatgcttacttacaagcccttaaccaacaatgcacttttaagaaaatagaggaaaatatttactaaataatataaagtaaacattttaataaaaagTTCAACAATAAAGAGGCTTtaaacagggggtaccagtactgagtcaatgtgcgggggtacgggttagtcgaggtaatttgtacatgtaagtAATGGTAAAGTGACTGCATCATTCCCATTTTAGTGTTCTTTCTAATGTGAAATTACATCATGGTAATTGACATGTTTCCTCATGGGTAGTTTCCTCATTAGCTGACAGAAAACACGCTCATTATATTGTTTTGATGAAAGGATATGGCTACACACTTTCACAAGTTCTAATTAGGCTAATTCTAGTTCCTATCACTCTCTCAGAAGAATCCACCAATTACTCAATCAGGCAAATCAATGAGGTGCTTTGTTAATTGATTACATCCTGACCTACCGGGCAAACCCCTAGAGACCCGGTAGTTCTTCAGGACAAAGTTTGGAGACAACCTGCCTGAGTCACTTTTTCCAGGTCTCCCTTGGGAAACAGGTCTTCTCacctcaatgggacttcctgtgtAATTTAAATAACGATGAAATAGAATAAAAGTACCAGTATTCTGATTTGATGAAGACCCCTAAATGGGAAACAAGGGTAGAGATCTAGAGAACAGATAGACTCGGAGATAGCAGTCATAATGGTATATATGATCTGTATACTACTGTCATGTGACTCAGTCAGATGTCTACTTTACCTGTTTTTTATGTTTTTCTGCCCATTTGCTCCTGAAGCAGTAGACTCCAGTCCGTTTTAGCCTTTTTACCCACATAGCAAGGACGGTTAACACCTACTTCAAATGTCAGGCAAAGCCCTTGACTACATAATGACAGCCATTAGCAGAGTTATGGGAGGCTGAGTGGGGTGTGCGTGTGTCTGGATCTCGATGCCACAGAAGCTCTTTAGACAGGCTACACTCTTAATACACAtgaactctcacacacacacacacacacacagagcactgcAGAGTAACAGCATGCTCGAAAACACAGTGCTctccatacagtacacacacaatgACTATCGTACAAAACAGGGACGTTGTTGTGGCGATGAGGGCAGGACAGCCAAAGATGCAGGTTTGGGAAGATGAAAAAGAGATGCATGGCATTTCAGCTTTCTGCAAAAAGTATCCTTGGAATGCGTTTTGTTTGTGTGTCAGAGATCCTCCATTGCTCTTCATCAAAACAAGCTCAAAGACACATTTCTTTATGACTGGGTCACCAAGATCAGCAGCTACGTAGAATCAGGGAGAACCTCCTTTGAAATGGATGAAATCAATTCCAGATATTTCAACTATTATTCAAGACTGGAATTGGGGAAACTGGGCAATGGGCCAGATGAACATAAAAACAAGACAAAGAAACATCAGACTGATCTAGATACTGATCTAAACtttgagagacagtgagtgacaaGCAGAGACGAGACATTTATGGTAATGAAAAATTGATCATGTTCTTTTTCTCAATATAAAAACAGACAAAGATGCAGTCCCTGGGGACCAAACATTATGGCGACAGACAGCTGATGATGACATAGTGGATGAGGCAGGCTTTAGGGGATACATAGTCCCGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510198 True 1668 lncRNA 0.41 2 85525811 85527502

Neighbor

gene id symbol gene type direction distance location
LOC110524719 ttc4 coding downstream 14334 85502967 ~ 85511477 (-)
lurap1 LOC106560455 coding downstream 53389 85443496 ~ 85472422 (-)
LOC118964733 NA coding downstream 82575 85435129 ~ 85443236 (-)
LOC110524715 col24a1 coding downstream 350374 84934006 ~ 85175437 (-)
LOC118964676 NA coding downstream 423889 85100248 ~ 85101922 (-)
sgip1a sgip1 coding upstream 4188 85531690 ~ 85652797 (-)
pde4ba pde4b coding upstream 154807 85682309 ~ 86031149 (-)
LOC118964679 NA coding upstream 543701 86071203 ~ 86071878 (-)
LOC110524724 lepr coding upstream 559691 86087193 ~ 86174451 (-)
LOC110524725 dnajc6 coding upstream 659885 86187387 ~ 86248090 (-)
G450679 LOC106560414 non-coding downstream 114839 85344855 ~ 85410972 (-)
G450683 NA non-coding downstream 177612 85346933 ~ 85348199 (-)
G450677 NA non-coding downstream 182131 85343362 ~ 85343680 (-)
G450673 LOC106560414 non-coding downstream 186652 85338840 ~ 85339159 (-)
G450790 NA non-coding upstream 55264 85582766 ~ 85612910 (-)
G450801 NA non-coding upstream 88478 85615980 ~ 85619096 (-)
G450818 NA non-coding upstream 115334 85642836 ~ 85643526 (-)
G450825 NA non-coding upstream 128032 85655534 ~ 85655803 (-)
G450837 LOC100194703 non-coding upstream 144422 85671924 ~ 85672425 (-)
G450752 NA other downstream 38653 85486842 ~ 85487158 (-)
G450676 NA other downstream 182739 85342788 ~ 85343072 (-)
G448452 NA other downstream 1609170 83916136 ~ 83916641 (-)
G448411 NA other downstream 1652503 83871602 ~ 83873308 (-)
G450957 NA other upstream 350231 85877733 ~ 85878974 (-)
G451271 NA other upstream 1021336 86548838 ~ 86549878 (-)
G451286 NA other upstream 1069850 86597352 ~ 86597744 (-)
ror1 LOC106560470 other upstream 1238081 86763372 ~ 87043134 (-)
G451856 NA other upstream 1714352 87241854 ~ 87243233 (-)

Expression


Co-expression Network