Gene
RNA
| Item | Value |
|---|---|
| gene id | G450899 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 85803153 ~ 85803490 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: aspartate aminotransferase, cytoplasmic-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU510344 | True | 338 | lncRNA | 0.43 | 1 | 85803153 | 85803490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sgip1a | sgip1 | coding | downstream | 150356 | 85531690 ~ 85652797 (-) |
| LOC110524719 | ttc4 | coding | downstream | 291676 | 85502967 ~ 85511477 (-) |
| lurap1 | LOC106560455 | coding | downstream | 330731 | 85443496 ~ 85472422 (-) |
| LOC118964733 | NA | coding | downstream | 359917 | 85435129 ~ 85443236 (-) |
| LOC118964676 | NA | coding | downstream | 701231 | 85100248 ~ 85101922 (-) |
| LOC118964679 | NA | coding | upstream | 267713 | 86071203 ~ 86071878 (-) |
| LOC110524724 | lepr | coding | upstream | 283703 | 86087193 ~ 86174451 (-) |
| LOC110524725 | dnajc6 | coding | upstream | 383897 | 86187387 ~ 86248090 (-) |
| ak4 | ak4 | coding | upstream | 450014 | 86253504 ~ 86260188 (-) |
| raver2 | raver2 | coding | upstream | 547852 | 86351342 ~ 86547212 (-) |
| G450897 | NA | non-coding | downstream | 4336 | 85798521 ~ 85798817 (-) |
| G450896 | NA | non-coding | downstream | 4819 | 85798063 ~ 85798334 (-) |
| G450888 | NA | non-coding | downstream | 29310 | 85773601 ~ 85773843 (-) |
| G450870 | NA | non-coding | downstream | 61392 | 85741468 ~ 85741761 (-) |
| G450845 | NA | non-coding | downstream | 113904 | 85689037 ~ 85689249 (-) |
| G450903 | NA | non-coding | upstream | 9338 | 85812828 ~ 85813180 (-) |
| G450904 | NA | non-coding | upstream | 9993 | 85813483 ~ 85813798 (-) |
| G450909 | NA | non-coding | upstream | 18336 | 85821826 ~ 85822032 (-) |
| G450917 | NA | non-coding | upstream | 27580 | 85831070 ~ 85831766 (-) |
| G450919 | NA | non-coding | upstream | 30303 | 85833793 ~ 85834005 (-) |
| G450752 | NA | other | downstream | 315995 | 85486842 ~ 85487158 (-) |
| G450676 | NA | other | downstream | 460081 | 85342788 ~ 85343072 (-) |
| G448452 | NA | other | downstream | 1886512 | 83916136 ~ 83916641 (-) |
| G448411 | NA | other | downstream | 1929845 | 83871602 ~ 83873308 (-) |
| G450957 | NA | other | upstream | 74243 | 85877733 ~ 85878974 (-) |
| G451271 | NA | other | upstream | 745348 | 86548838 ~ 86549878 (-) |
| G451286 | NA | other | upstream | 793862 | 86597352 ~ 86597744 (-) |
| ror1 | LOC106560470 | other | upstream | 962093 | 86763372 ~ 87043134 (-) |
| G451856 | NA | other | upstream | 1438364 | 87241854 ~ 87243233 (-) |
