G450308


Basic Information

Item Value
gene id G450308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86405722 ~ 86405947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509667
TCTTGGTTGGGGTGAGAGAGGTTATACAACCTGCTACTAGGGAGAGGAGCTCCAGGCTGAAGCTCGATAGCACAGTCGTAAGGCCGATGAGGCGGCAGAGATGGGGTGTGGTGCTTGCTGAATACAGGACCTAGACAATGATATTCTGGAGGAACAGAAGACAGGTCTGGGGGTTCTGGAATGGACTGGGGTGCAGACAAGGCAGGAGGATGGGCAGAATGTAGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106608106

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509667 True 226 lncRNA 0.54 1 86405722 86405947

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 36782 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 62338 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 143570 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 179777 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 746814 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 688087 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 995823 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 1115758 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1765812 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1855489 88261436 ~ 88263514 (+)
G450304 NA non-coding upstream 3031 86402356 ~ 86402691 (+)
G450297 NA non-coding upstream 9728 86395763 ~ 86395994 (+)
G450293 NA non-coding upstream 19962 86380894 ~ 86385760 (+)
G450237 NA non-coding upstream 52787 86349355 ~ 86352935 (+)
G450273 NA non-coding upstream 84229 86319185 ~ 86321493 (+)
G450316 NA non-coding downstream 12059 86418006 ~ 86425240 (+)
G450317 NA non-coding downstream 20826 86426773 ~ 86444284 (+)
G450318 NA non-coding downstream 28193 86434140 ~ 86439351 (+)
G450321 NA non-coding downstream 38808 86444755 ~ 86451292 (+)
G450332 raver2 non-coding downstream 61690 86467637 ~ 86468409 (+)
G449809 NA other upstream 958147 85445964 ~ 85447575 (+)
G449774 NA other upstream 1076780 85328572 ~ 85328942 (+)
LOC118964674 NA other upstream 2016121 84386803 ~ 84389601 (+)
G448698 NA other upstream 2103249 84302100 ~ 84302473 (+)
LOC110524684 NA other upstream 2611369 83788574 ~ 83794357 (+)
G450333 NA other downstream 62591 86468538 ~ 86468937 (+)
G450331 NA other downstream 148526 86554473 ~ 86558452 (+)
G450394 NA other downstream 190200 86596147 ~ 86596515 (+)
G451408 LOC106584030 other downstream 437929 86843876 ~ 86844271 (+)

Expression


Co-expression Network