G451159


Basic Information

Item Value
gene id G451159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86476818 ~ 86478516 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510624
ggaactgtaaagcgacagtaagaggcactgtaaagggacAGGAATAGGAACTGTAAATAGACAAGAAGAGGCACTGAAAAAAGCGACAggatgaggaactgtaaagagacaggaagaggaactgaaaaaagagacaggatgaggaactgtaaagagacaggaagaggaactgaaaaaagagacaggacgaggaactgtaaagagacaggaagagggactgtaaagagacagaaagaggaactgtgaagagacaggaagaggcactgtcaagagacaggaagaggcactttaaagagacaggaagaggcactttaAAGAAacgggaagaggaactgtaaagcgaCAGTAAGAGGCACTTtaaaaagagacaggaagaggcactgtaaagtgacaggaagaggaactgtaaagaaacaggaagagaaactGTAAAGaggcaggaagaggcactgtaaagagacaggaagaggcactgtaaagagacaggaagaggaactgaaaaaagagacaggatgaggaactgtaaagagacaggaagaggaactgtaaagagacaggaagaggcactgtcaagagatttgaagaggcactgtaaagagacaggaagaggcactgtcaagagatttgaagaggcactgtaaagggacaggaagagcaACTGTaaatagacaggaagaggaactgtaaagagacaggaagaggaactgtcaagagatttgaagaggcactgtaaagggacaggaagagcaactgtaaagagacaggaagaggatctgtgaagagacaggaagagccaggaagaggaactgtaaagagacaggaagaggcactgtcaagagatttgaagaggcactgtaaagagacaggaagaggcactgtcaagagatttgaagaggcactgtaaagggacaggaagagcaactgtaaagagacaggaagaggcactgtaaagagacaggaagaggcactgtaaagaaacgggaagaggaactgtaaagcgaCAGTAAGAGGGACTGtaaaaagagacaggaagaggaactgtaaagtgacaggaagaggaactgtaaagaaacaggaagaggcactgtaaagagacaggaagaggcactgtaaagagacaggaagaggcactgtaaagacacaggaagaggcactgtaaaaagagacaggaagaggcactgtaaaaagaaacaggaagaggaactgtaaagagacaggaagcggcactgtaaagagacaggaagaggaactgtaaagagacaggaagaggcactgtaaagagacaggaagaggaactgtaaagagacaggaagaggaactgtaaagagacaggaagaggaactgtaaagagacaggaagaggcactgtaaagagacaggaagaggaactaaagagacaggaagaggaactgtaaagagacaggaagaggcactgtcaagacacaggaagaggaactgtaaagagacaggaagaggcactgtaaagataCAGGAATATGAACAGTGTGCTATGAAAGTCAAGTACATTGCTTGAAGAAGGAGCGCTTGTATCCTATCTGGCCAGGGCCGGTCTTTGCCATTCAAGCAAAATATTTTGCGCCCCTGCTtttgacaaagtgggcactgcttatcaAAGGACGGCATCAGCGCTCACCTAAAAAGCCCATATGCCACTGGTTAAGagaaattgtttttgtttt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594949

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU510624 True 1699 lncRNA 0.45 1 86476818 86478516

Neighbor

gene id symbol gene type direction distance location
ak4 ak4 coding downstream 216630 86253504 ~ 86260188 (-)
LOC110524725 dnajc6 coding downstream 228728 86187387 ~ 86248090 (-)
LOC110524724 lepr coding downstream 302367 86087193 ~ 86174451 (-)
LOC118964679 NA coding downstream 404940 86071203 ~ 86071878 (-)
pde4ba pde4b coding downstream 445669 85682309 ~ 86031149 (-)
cachd1 cachd1 coding upstream 78214 86556176 ~ 86712442 (-)
ror1 LOC106560470 coding upstream 284856 86763372 ~ 87043134 (-)
pgm1 LOC106560477 coding upstream 576518 87055034 ~ 87067699 (-)
efcab7 efcab7 coding upstream 593315 87071831 ~ 87093894 (-)
alg6 alg6 coding upstream 629484 87108000 ~ 87144341 (-)
G451243 NA non-coding downstream 10180 86466100 ~ 86466638 (-)
G451222 NA non-coding downstream 54211 86417741 ~ 86422607 (-)
G451186 NA non-coding downstream 141943 86300595 ~ 86334875 (-)
G451053 NA non-coding downstream 173857 86251118 ~ 86302961 (-)
G451089 NA non-coding downstream 340471 86136136 ~ 86136347 (-)
G451252 NA non-coding upstream 40412 86518928 ~ 86519152 (-)
G451253 NA non-coding upstream 40804 86519320 ~ 86519645 (-)
G451256 NA non-coding upstream 45510 86524026 ~ 86524277 (-)
G451260 NA non-coding upstream 53057 86531573 ~ 86531861 (-)
G451261 NA non-coding upstream 54332 86532848 ~ 86533221 (-)
G450957 NA other downstream 597844 85877733 ~ 85878974 (-)
G450752 NA other downstream 989660 85486842 ~ 85487158 (-)
lurap1 LOC106560455 other downstream 1004938 85443496 ~ 85472422 (-)
G450676 NA other downstream 1133746 85342788 ~ 85343072 (-)
G448452 NA other downstream 2560177 83916136 ~ 83916641 (-)
G451271 NA other upstream 70322 86548838 ~ 86549878 (-)
G451286 NA other upstream 118836 86597352 ~ 86597744 (-)
G451856 NA other upstream 763338 87241854 ~ 87243233 (-)
G452255 NA other upstream 1019850 87498366 ~ 87499136 (-)

Expression


Co-expression Network