G450362


Basic Information

Item Value
gene id G450362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86547682 ~ 86547957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509740
ggccttactgaagagctcagagacgttcaacgtggcactgtcataggatgccacctttccaacaagtcagttcatcaaatttctgctctacgagagctgccctggtcaactgtaagtgctgttattgtttaagtggtaggccacacaagctcacaaaacagGGCCATCGGGTGCTGAAGCGAgtagtctgtccttggttgcaacactcactacagagttccaaactgcctctggaagcaacgtcagcacaagaacggttcatcaggagcttcatga

Function

NR:

description
protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509740 True 276 lncRNA 0.49 1 86547682 86547957

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 178742 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 204298 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 285530 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 321737 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 888774 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 546077 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 853813 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 973748 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1623802 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1713479 88261436 ~ 88263514 (+)
G450361 raver2 non-coding upstream 517 86546927 ~ 86547165 (+)
G450360 NA non-coding upstream 6078 86541369 ~ 86541604 (+)
G450354 NA non-coding upstream 14471 86532829 ~ 86533211 (+)
G450353 NA non-coding upstream 16312 86531154 ~ 86531370 (+)
G450349 NA non-coding upstream 24003 86523241 ~ 86523679 (+)
G450364 NA non-coding downstream 1066 86549023 ~ 86549504 (+)
G450366 NA non-coding downstream 5579 86553536 ~ 86553947 (+)
G450331 NA non-coding downstream 6516 86554473 ~ 86558452 (+)
G450367 NA non-coding downstream 11945 86559902 ~ 86560257 (+)
G450369 NA non-coding downstream 12694 86560651 ~ 86561005 (+)
G450333 NA other upstream 78745 86468538 ~ 86468937 (+)
G449809 NA other upstream 1100107 85445964 ~ 85447575 (+)
G449774 NA other upstream 1218740 85328572 ~ 85328942 (+)
LOC118964674 NA other upstream 2158081 84386803 ~ 84389601 (+)
G448698 NA other upstream 2245209 84302100 ~ 84302473 (+)
G450394 NA other downstream 48190 86596147 ~ 86596515 (+)
G451408 LOC106584030 other downstream 295919 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 872847 87420804 ~ 87422836 (+)

Expression


Co-expression Network