G450364


Basic Information

Item Value
gene id G450364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86549023 ~ 86549504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509742
cttttacgccaaacataacattttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaccaacactttttatggatttctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtcttccacctcagctgtagatctctgcagttcatccagagtgatcatggacctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggacaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtgtctcg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509742 True 482 lncRNA 0.42 1 86549023 86549504

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 180083 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 205639 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 286871 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 323078 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 890115 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 544530 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 852266 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 972201 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1622255 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1711932 88261436 ~ 88263514 (+)
G450362 NA non-coding upstream 1066 86547682 ~ 86547957 (+)
G450361 raver2 non-coding upstream 1858 86546927 ~ 86547165 (+)
G450360 NA non-coding upstream 7419 86541369 ~ 86541604 (+)
G450354 NA non-coding upstream 15812 86532829 ~ 86533211 (+)
G450353 NA non-coding upstream 17653 86531154 ~ 86531370 (+)
G450366 NA non-coding downstream 4032 86553536 ~ 86553947 (+)
G450331 NA non-coding downstream 4969 86554473 ~ 86558452 (+)
G450367 NA non-coding downstream 10398 86559902 ~ 86560257 (+)
G450369 NA non-coding downstream 11147 86560651 ~ 86561005 (+)
G450371 NA non-coding downstream 13327 86562831 ~ 86563073 (+)
G450333 NA other upstream 80086 86468538 ~ 86468937 (+)
G449809 NA other upstream 1101448 85445964 ~ 85447575 (+)
G449774 NA other upstream 1220081 85328572 ~ 85328942 (+)
LOC118964674 NA other upstream 2159422 84386803 ~ 84389601 (+)
G448698 NA other upstream 2246550 84302100 ~ 84302473 (+)
G450394 NA other downstream 46643 86596147 ~ 86596515 (+)
G451408 LOC106584030 other downstream 294372 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 871300 87420804 ~ 87422836 (+)

Expression


Co-expression Network