G451241


Basic Information

Item Value
gene id G451241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86554913 ~ 86556046 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU510709
aacaaaccaaaatatatttgagattttagattcttcaaagtagccaccatttgcctcgatgacagctttgcacacttggcattctctcaaccagcttcacctggaatgctttaccaacagtcttgaaggagtttccatgtatatgctgagcacttgttggctactttcccttcactctgcagtccaacttatcccaaaccatctcaattgggttgaggttggtgattgcggaggccaggtcatctgatgcagcattccatcactctccttggtcaaatagtccttacacagcctggaggtgtgttgggtcattgtcctgtggtgAAACAAATGATaggtcccactaagcgcaaaccagatgggatggcatatcactgcagaatgctgtggtagccatgctgtttaggtgtgccttgaattctaaataaatcactgacagtgtcacgagcaaagcacccccataccatcacaccacctcctccatgcttcacgtgggaaccacacatgcggagatcatatgttcacctactctacgtctcacaaaaacacagcagttggaaccaaaaatatataaaatctgACCGaagtacagatttccaccggtctaatgtccatcactcgtgtttcttggcccaagcaagtctcttcttattattggtgttctttagtagtggtttctctgcATCAAcgagaccatgaaggcctgattcacacagtctcctctgaacagttgatgctgagatgtgtctgttacttgaactctgtgaagcatttatttggctgaaatttctgagtctggtaactcgaatgaacaTATCCCCTGCAATAgacgtaactctgggtcttcctttcctttggcgatcctcacgagagccagtttcatcataacgcttgatggtttttgtgatggactgtcgtttctctttacttatttgagctgttcttgccataatatggactttgtcttgtaccaaatagggctatcttctgtataccacccctaccttgtcacaacacaactgattggctcaaatgtattaatagggaaagaaattccacaaattaacttttaacaaggcacctgAAGTgcatccaggtgactacctcatgaagctggttgagagaatgccaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU510709 True 1134 lncRNA 0.44 1 86554913 86556046
Loading

Neighbor

gene id symbol gene type direction distance location
raver2 raver2 coding downstream 7701 86351342 ~ 86547212 (-)
ak4 ak4 coding downstream 294725 86253504 ~ 86260188 (-)
LOC110524725 dnajc6 coding downstream 306823 86187387 ~ 86248090 (-)
LOC110524724 lepr coding downstream 380462 86087193 ~ 86174451 (-)
LOC118964679 NA coding downstream 483035 86071203 ~ 86071878 (-)
cachd1 cachd1 coding upstream 684 86556176 ~ 86712442 (-)
ror1 LOC106560470 coding upstream 207326 86763372 ~ 87043134 (-)
pgm1 LOC106560477 coding upstream 498988 87055034 ~ 87067699 (-)
efcab7 efcab7 coding upstream 515785 87071831 ~ 87093894 (-)
alg6 alg6 coding upstream 551954 87108000 ~ 87144341 (-)
G451240 NA non-coding downstream 115 86554465 ~ 86554798 (-)
G451273 NA non-coding downstream 1685 86552843 ~ 86553228 (-)
G451266 NA non-coding downstream 16329 86538142 ~ 86538584 (-)
G451261 NA non-coding downstream 21692 86532848 ~ 86533221 (-)
G451260 NA non-coding downstream 23052 86531573 ~ 86531861 (-)
G451281 NA non-coding upstream 23841 86579887 ~ 86580526 (-)
G451284 NA non-coding upstream 31380 86587426 ~ 86587961 (-)
G451291 NA non-coding upstream 56878 86612924 ~ 86613373 (-)
G451297 NA non-coding upstream 88154 86644200 ~ 86647345 (-)
G451271 NA other downstream 5035 86548838 ~ 86549878 (-)
G450957 NA other downstream 675939 85877733 ~ 85878974 (-)
G450752 NA other downstream 1067755 85486842 ~ 85487158 (-)
lurap1 LOC106560455 other downstream 1083033 85443496 ~ 85472422 (-)
G450676 NA other downstream 1211841 85342788 ~ 85343072 (-)
G451286 NA other upstream 41306 86597352 ~ 86597744 (-)
G451856 NA other upstream 685808 87241854 ~ 87243233 (-)
G452255 NA other upstream 942320 87498366 ~ 87499136 (-)
LOC110523029 LOC106584023 other upstream 1218176 87685213 ~ 88049103 (-)

Expression

G451241 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
End of interactive chart.

G451241 Expression in each Bioproject

Bar chart with 16 bars.
G451241 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network