G450369


Basic Information

Item Value
gene id G450369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86560651 ~ 86561005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509747
CACTAACGAGCTGTATTTCCATAGTCAGTTGTTCTAGGTAACATTCATCTCCAGTATGTCGAAGTGTCTTACCCTGCGCGGCCAGAGGGGACATGTGTTGATGTGAGCGCCGGTGGAGCTGGTGTCTGTAGGCGTATACAGCCAACACCAGCACCATGATACAGCCCATAATCCCCCCAGCAACCGGCCCTACCGGTGCACTCCGAATCATGTTCAGAGACGCTACCTCCTCAtctggaaggagggaggggagagagagacagtggaggaaGGGTTAAACACATTAGATCTATTATGCTAACCAAATTCTTCTAGGAGGACTATGACATGTATTTAGCCAGAGCTATGTATTTAG

Function

NR:

description
PREDICTED: VWFA and cache domain-containing protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509747 True 355 lncRNA 0.50 1 86560651 86561005

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 191711 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 217267 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 298499 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 334706 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 901743 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 533029 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 840765 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 960700 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1610754 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1700431 88261436 ~ 88263514 (+)
G450367 NA non-coding upstream 394 86559902 ~ 86560257 (+)
G450331 NA non-coding upstream 2199 86554473 ~ 86558452 (+)
G450366 NA non-coding upstream 6704 86553536 ~ 86553947 (+)
G450364 NA non-coding upstream 11147 86549023 ~ 86549504 (+)
G450362 NA non-coding upstream 12694 86547682 ~ 86547957 (+)
G450371 NA non-coding downstream 1826 86562831 ~ 86563073 (+)
G450372 NA non-coding downstream 2829 86563834 ~ 86564050 (+)
G450373 NA non-coding downstream 3580 86564585 ~ 86564798 (+)
G450377 NA non-coding downstream 8214 86569219 ~ 86575598 (+)
G450387 cachd1 non-coding downstream 23731 86584736 ~ 86584988 (+)
G450333 NA other upstream 91714 86468538 ~ 86468937 (+)
G449809 NA other upstream 1113076 85445964 ~ 85447575 (+)
G449774 NA other upstream 1231709 85328572 ~ 85328942 (+)
LOC118964674 NA other upstream 2171050 84386803 ~ 84389601 (+)
G450394 NA other downstream 35142 86596147 ~ 86596515 (+)
G451408 LOC106584030 other downstream 282871 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 859799 87420804 ~ 87422836 (+)

Expression


Co-expression Network