XLOC_023636


Basic Information

Item Value
gene id XLOC_023636
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 37069683 ~ 37076817 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047253
GAAGCACTCTGGAGTCCTGCATCACTCACTTTTCTCCATGCATTTCACTTTCTTCACCCATTCTGAATGGTTTGATCGTGAACACTTTTAGCTCTTTTGCATGCTGGAAACTCATTTCTAGTTGTCTGTTGTGATTCTTTTCCATGCAGACTGAAGTCAAAGTTAGTCAACTTTTGCAGAGCCGCATTTAAAAAGGCTCCAGCATGAGGAAGCCTCAAAGAAAGTCAAGATGGCACTTAAAAGtgttcagacagcagagacgccatgttgtgttgccaaaacaagtggaagaccAAGaatttggagacatgggtcgtcagcaTTGCGTTATTAATTTATGCAACGAAGGTTTCGTTTTCATTTCCAtgctatgagagtgcagctggaccCACGTGTGGACTACAGTGGACATGtggcagaaatacgtttgtaaggt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047253 True 436 lncRNA 0.43 2 37069683 37076817

Neighbor

gene id symbol gene type direction distance location
XLOC_023635 NA coding downstream 19772 37046594 ~ 37049911 (-)
XLOC_023634 dnaaf3 coding downstream 66106 36995295 ~ 37003577 (-)
XLOC_023633 dnaaf3l coding downstream 159459 36903172 ~ 36910224 (-)
XLOC_023632 NA coding downstream 190556 36872875 ~ 36879127 (-)
XLOC_023631 fam171a2b coding downstream 243179 36812640 ~ 36826504 (-)
XLOC_023637 NA coding upstream 93500 37170317 ~ 37170924 (-)
XLOC_023638 cog7 coding upstream 118646 37195463 ~ 37225877 (-)
XLOC_023639 ube2ib coding upstream 180779 37257596 ~ 37272116 (-)
XLOC_023640 CABZ01055522.1 coding upstream 197942 37274759 ~ 37287792 (-)
XLOC_023641 NA coding upstream 212651 37289468 ~ 37295101 (-)
XLOC_023665 dre-mir-735 misc upstream 1101144 38177961 ~ 38178027 (-)
XLOC_023628 NA non-coding downstream 370676 36689295 ~ 36699007 (-)
XLOC_023625 NA non-coding downstream 490216 36574093 ~ 36579467 (-)
XLOC_023621 NA non-coding downstream 641902 36275575 ~ 36427781 (-)
XLOC_023644 CU469584.1 non-coding upstream 284372 37361189 ~ 37404466 (-)
XLOC_023651 NA non-coding upstream 628809 37705626 ~ 37708051 (-)
XLOC_023652 NA non-coding upstream 648157 37724974 ~ 37726949 (-)

Expression


Co-expression Network