G450429


Basic Information

Item Value
gene id G450429
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86658982 ~ 86659192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU509812
CATATTGGGCTCTGTGGTTGCTGTAGCTCTTGCCAGCCCGTCTCAGACCATGCAGTTCCGGTTCAGTGTGGTTAGGGCTAGAATACGCCTGGGTTAGGGAGGAGAGCTGTGACCCGGATCAGTACCAGACTGGGTGAATGTTACTAAATAACTAGCCCATCAAGGTCATTCCATACAGctgaacagaaacagagaaaccCTTCCGTTAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU509812 True 211 lncRNA 0.51 1 86658982 86659192

Neighbor

gene id symbol gene type direction distance location
LOC118964680 NA coding upstream 290042 86364739 ~ 86368940 (+)
jak1 jak1 coding upstream 315598 86264428 ~ 86343384 (+)
LOC110524728 NA coding upstream 396830 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 433037 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 1000074 85656730 ~ 85659355 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 434842 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 742578 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 862513 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1512567 88171759 ~ 88177340 (+)
fam183a LOC106560522 coding downstream 1602244 88261436 ~ 88263514 (+)
G450428 NA non-coding upstream 1362 86657277 ~ 86657620 (+)
G450427 NA non-coding upstream 2170 86656595 ~ 86656812 (+)
G450421 NA non-coding upstream 18682 86640098 ~ 86640300 (+)
G450418 NA non-coding upstream 22359 86636323 ~ 86636623 (+)
G450417 NA non-coding upstream 22969 86635757 ~ 86636013 (+)
G450431 NA non-coding downstream 22805 86681997 ~ 86682272 (+)
G450439 NA non-coding downstream 41444 86700636 ~ 86700860 (+)
G450445 cachd1 non-coding downstream 52751 86711943 ~ 86712373 (+)
G451354 NA non-coding downstream 90338 86749530 ~ 86750118 (+)
G451369 LOC106584030 non-coding downstream 107481 86766673 ~ 86766972 (+)
G450394 NA other upstream 62467 86596147 ~ 86596515 (+)
G450331 NA other upstream 102935 86554473 ~ 86558452 (+)
G450333 NA other upstream 190045 86468538 ~ 86468937 (+)
G449809 NA other upstream 1211407 85445964 ~ 85447575 (+)
G449774 NA other upstream 1330040 85328572 ~ 85328942 (+)
G451408 LOC106584030 other downstream 184684 86843876 ~ 86844271 (+)
G451959 LOC106584028 other downstream 761612 87420804 ~ 87422836 (+)
G452064 NA other downstream 958940 87618132 ~ 87620643 (+)

Expression


Co-expression Network